| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1829 |
|---|
| Symbol | |
|---|
| ID | 6163936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1978282 |
|---|
| End bp | 1978707 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641664591 |
|---|
| Product | BLUF domain-containing protein |
|---|
| Protein accession | YP_001790861 |
|---|
| Protein GI | 171058512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0371971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTAC GTCTGCTTTA CGCGAGCCGC ACCGATGCGG TCGATCACGC GCTCATCGAC
GCCATCCTGG TGCAGTCGCG CGCCAAGAAC CCGGCGCTGG GCATCACCGG CATCCTGTGT
CATGGCGGCG ACGTCTTCAT GCAGGTGCTC GAGGGCGGGC GCGAGGTCGT CAACCGCCTG
TACAACCAGA TTGCCGCCGA TCCGCGCCAC CACCAGGTCA CGCTGCTGCA CTTCGAGGAA
ATCGCCGAAC GCCGTTTCTC CGGCTGGACG ATGGGCCAGG TCAACCTGCT GCGTGTCAAC
CCGTCGGTGG TGCTCAAGTA CAGCGAGAAG CCGCTGCTCG ACCCCTTCTG CGTGTCCGGC
CGGGCCTCGA TGGCGATGCT CGAGGAGCTG ATCGCCACCG CCTCGATCGT CGGCCGCGCC
GGCTGA
|
|---|
| Protein sequence | MLVRLLYASR TDAVDHALID AILVQSRAKN PALGITGILC HGGDVFMQVL EGGREVVNRL
YNQIAADPRH HQVTLLHFEE IAERRFSGWT MGQVNLLRVN PSVVLKYSEK PLLDPFCVSG
RASMAMLEEL IATASIVGRA G
|
|---|
| |