| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1817 |
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| Symbol | |
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| ID | 6161379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1963721 |
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| End bp | 1965568 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664579 |
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| Product | aldehyde ferredoxin oxidoreductase |
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| Protein accession | YP_001790849 |
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| Protein GI | 171058500 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00038384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCTGGG CAGGAAAACT TCTTCGCGTC AATCTGACGA CCGGCACCAT TGCCACCGAA
CCGCTGAACA TGGCGTGGGC CAGGCAGTAT CTGGGCTCGC GTGGCCTGGC CACCAAATAC
CTGGTCGAGG AAATCGACGC CAAGGTCGAC CCGCTGTCGA TCGACAACAA GATCATCTGG
TCGACCGGCC CGCTGACAGG CACGATGGCC TCCACCGGTG GCCGCTACAC GGTCGTCACC
AAGGGCCCGC TGACCGGCGC CATCGCCTGC TCCAACTCGG GCGGCTACTG GGGCGCCGAG
CTCAAGATGG CCGGCTGGGA CATGGTGATC TTCGAGGGCA GGTCGCCCAA GCCGGTCTAC
CTGTCGATCC AGGACGACGT GGTCGAACTG AAAGACGCCG CGCACCTGTG GGGCAAGAGC
GTCTGGGAAA CCGAGGCCAC GATCAAGGCC TCGCACCAGG ATCCGCTGGT GCGTGTGTCG
AGCATCGGCC TGGCCGGTGA GAACCAGGTG CTGTTCGCAG CCGTGGTCAA CGACCTGCAC
CGCGCCGCCG GCCGTTCGGG CGTGGGCGCC GTGATGGGCA GCAAGAACCT CAAGGCGGTG
GTCGTTCGCG GCACCAAGGG CGTGGGCAAT CTGGCCAACC CCAAGGAGTT CATGCGCGTC
ACCGCCGAGA AGAAGAAGAT CCTGCACGAC AACGCCGTCA CCGGTGCCGG CCTGCCGACC
TACGGCACCC AGGTGCTGAT GAGCGTGATC AACGAGATGG GCGCGCTGCC CACCCGCAAT
CACCGCGATG TCGCCTTCGA GGGCGCCAAG GACATCGGCG CCGAGGCGAT GGCCACGCCG
CGTGCCACCG ACGGCAAGAA GCAGCTGGTG ACCAACCAGG CCTGCTTCGG CTGCACCATC
GCGTGCGGGC GCATCAGCAA GATCGACAAG ACCCACTTCA CGGTGCAGAC CAAGCCGCAG
TACTGGGGCG CCAGCGGCGG CCTGGAATAC GAAGCGGCCT GGGCGCTGGG TGCGGCCAAC
GGCGTCAACG ACCTCGAGGC GCTGCAGTAC GCCAACGTGC TGTGCAACGA GCAGGGCATG
GATCCGATCT CCTTCGGCGC CACCATCGGC GCGGTGATGG AGCTCTACGA GATGGGCGTG
CTGACCAAGG AGCAGCTCGG CATCGACGCC AAGTTCGGCG ACGCCCAGGC GCTGGCCTAC
TTCGCCGAGA TCACCGCCCG CGGTGAAGGC TTCGGCAAGG AGATCGGCCA GGGCTCGGCC
CGGCTGACGA AGAAGTACGG CCACCCCGAC CTGTCGATGA GCGTCAAGGG CCAGGAATTC
CCGGCCTACG ACTCGCGCGG CATCCAGGGC ATGGGCCTGA CCTACGCGAC GTCCAACCGC
GGCGCCTGCC ACCTGCGCAG CTACACGGTG GCCTCCGAGG TGCTGGGCAT CCCGGTCAAG
ACCGACCCGC TGACGGCCGA CGGCAAGCCC GAACTCGTGA TGGCGTTCCA GGACGCCACC
GCGGCCTTCG ACGCGGCCGG CATCTGCATC TTCACCAGCT TCGCCTGGGG CCTGGCCGAC
GTGCAGCCGC AGGTGGCGGC GGCCTGCGGT GACGAGTTCA CGCTCGAGAA CCTGAGCCAG
ATCGGCGAGC GGATCTGGAA CATGGAGCGC GACTTCAACA ACCGCGCCGG CTTCACGGCC
AAGGACGACA CGCTGCCCAA GCGCCTGCTC GAAGAGCCGG CCAAGACCGG CCCGGCCAAG
GGCCTGGTCA ACAAGCTGCC CGAGATGCTG CCCAAGTACT ACGACATCCG CGGCTGGGAC
GCCGACGGCC AGCTCAAGCC CGAGACCCGC AGCCGCCTGG GGCTGTGA
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| Protein sequence | MSWAGKLLRV NLTTGTIATE PLNMAWARQY LGSRGLATKY LVEEIDAKVD PLSIDNKIIW
STGPLTGTMA STGGRYTVVT KGPLTGAIAC SNSGGYWGAE LKMAGWDMVI FEGRSPKPVY
LSIQDDVVEL KDAAHLWGKS VWETEATIKA SHQDPLVRVS SIGLAGENQV LFAAVVNDLH
RAAGRSGVGA VMGSKNLKAV VVRGTKGVGN LANPKEFMRV TAEKKKILHD NAVTGAGLPT
YGTQVLMSVI NEMGALPTRN HRDVAFEGAK DIGAEAMATP RATDGKKQLV TNQACFGCTI
ACGRISKIDK THFTVQTKPQ YWGASGGLEY EAAWALGAAN GVNDLEALQY ANVLCNEQGM
DPISFGATIG AVMELYEMGV LTKEQLGIDA KFGDAQALAY FAEITARGEG FGKEIGQGSA
RLTKKYGHPD LSMSVKGQEF PAYDSRGIQG MGLTYATSNR GACHLRSYTV ASEVLGIPVK
TDPLTADGKP ELVMAFQDAT AAFDAAGICI FTSFAWGLAD VQPQVAAACG DEFTLENLSQ
IGERIWNMER DFNNRAGFTA KDDTLPKRLL EEPAKTGPAK GLVNKLPEML PKYYDIRGWD
ADGQLKPETR SRLGL
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