Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1815 |
Symbol | |
ID | 6161377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1962157 |
End bp | 1963005 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664577 |
Product | hypothetical protein |
Protein accession | YP_001790847 |
Protein GI | 171058498 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2998] ABC-type tungstate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000089801 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCTGA AGCCGATTCG AATGATCCTG CGCTCGCGCC GCACGCTGAT GGCCTGCGCG GTGGGGGCCC TGATCTGTGC CGCCACGCTG TCGCAGGCAC AGGAGAAGTT CATCGTGGTG GCGTCCACCA CCTCCACCGA GCAGTCCGGG CTGTTCGGCC AGCTGCTGCC GCAGTTCAAG GCGGCCACCG GCATCGACGC CCGCGTCGTC GCGCTGGGCA CCGGCCAGGC GCTCGACATG GGCCGGCGCG GCGATGCCGA CGTGGTGTTC GTGCACGACC AGGCGGCCGA GGAGAAGTTC GTCGCCGACG GCTGGGGCGT CAGGCGCTAC CCGGTCATGT ACAACGATTT CGTGCTGGTC GGCCCGGCCG CAGACCCGGC CAAGGTGCGC GGCAAGGACA TCGTCACCGG CCTGCAGAAG CTCGCGGCCA GCGGCGCGGC CTTCATCTCG CGCGGCGACA AGAGCGGCAC CCACGCCGCC GAGCTGCGCT ACTGGAAGCA GGCCGGCGTC GACCTGGCCG CGGCCAAGCC GGCCGGCTAC CGCGAATGCG GCTGCGGCAT GGGCCCGGCG CTCAACATGG GGTCGAGCAG CAACGCCTAC GTGCTGACCG ACCGCGGCAC CTGGCTGTCG TTCAAGAACC GCGGCGACCT GACCGTGCTG GTCGAGGGCG ACACCCGGCT GTTCAACCAG TACGGCGTGA TGCTGGTCAA TCCGGCCAAG CATGCGCACG TCAAGCAGGC GCTCGGCCAG AGCTTCGTCG ACTGGGTGGT CTCGGCGCCC GGTCAGGCGG CGATCGCGGC CTACAAGATC GGCGGCGAGC AGCTGTTCTT CCCGAACGCG GCACGCTGA
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Protein sequence | MDLKPIRMIL RSRRTLMACA VGALICAATL SQAQEKFIVV ASTTSTEQSG LFGQLLPQFK AATGIDARVV ALGTGQALDM GRRGDADVVF VHDQAAEEKF VADGWGVRRY PVMYNDFVLV GPAADPAKVR GKDIVTGLQK LAASGAAFIS RGDKSGTHAA ELRYWKQAGV DLAAAKPAGY RECGCGMGPA LNMGSSSNAY VLTDRGTWLS FKNRGDLTVL VEGDTRLFNQ YGVMLVNPAK HAHVKQALGQ SFVDWVVSAP GQAAIAAYKI GGEQLFFPNA AR
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