| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1806 |
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| Symbol | |
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| ID | 6163445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1948427 |
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| End bp | 1949269 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664568 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790838 |
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| Protein GI | 171058489 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000978689 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGCCT ACCGACACGC CTTTCACGCT GGCAACCATG CCGATGTCCT CAAGCACCTG
GTGCTGGTGC AGGTGCTGCA ATACATGGCG TCCAAGGACA AACCCTTTCG CCTGATCGAC
ACCCATGCCG GCGGCGGCGG CTACGCGCTG CACAGCTCGC AGTCGCAGAA GAAGGGCGAA
TACCTGCAGG GCATCTCGCG CATCTGGGGG GCCGGTGATG CCCCGCCGGC GGTGGCCGAC
TACCTGCGTC TGGTGCGCCG CTTCAACCCC GACGGCCAGC TCAATCTCTA TCCGGGCTCG
CCGGCGCTGT CGCAGATGCT GCTGCGCCGT GGCGATCAGC TGCGGCTGTT CGAACTGCAT
CCCACCGAGT TCAAGATCCT GACCGAGAAC ACCCGGCCCG GCCGCCAGGT GCAGCTGGCG
CAGGTCGACG GCTTCGCAGC CCTGCGCGGC CAGGTGCCGC CGTCGATGCG CCGCGGCGTG
GTGCTGATGG ATCCGTCGTA CGAACTGGTG TCCGATTACG CCAAGGTGAT CGACAGCCTG
CGCGACGCGC TGCAGCGCTT TGCCGAAGGC GTCTACGTGG TCTGGTACCC GCAGGTCAGC
CGGGTCGAGT CGATCCAGAT CGCGCGCCGC CTGCAGGCCA CGGCGCCCAA GGGCTGGCTG
CATGTGCGGC TCAATGTGCA GCAGCCCGAC GCGCAAGGAT TCGGGCTCAC CGGCAGCGGC
GTGTTCGTGA TCAACCCGCC GTACACCTTG CATGCGCAAC TGGCGGCCTG CATGCCGTGG
CTGACACAGA AGCTCGGTCA GTTCGAGGGC GCCAACCATC TGCTGGAGCA CCACGCCGTC
TGA
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| Protein sequence | MLAYRHAFHA GNHADVLKHL VLVQVLQYMA SKDKPFRLID THAGGGGYAL HSSQSQKKGE
YLQGISRIWG AGDAPPAVAD YLRLVRRFNP DGQLNLYPGS PALSQMLLRR GDQLRLFELH
PTEFKILTEN TRPGRQVQLA QVDGFAALRG QVPPSMRRGV VLMDPSYELV SDYAKVIDSL
RDALQRFAEG VYVVWYPQVS RVESIQIARR LQATAPKGWL HVRLNVQQPD AQGFGLTGSG
VFVINPPYTL HAQLAACMPW LTQKLGQFEG ANHLLEHHAV
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