| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1795 |
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| Symbol | |
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| ID | 6160830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1938773 |
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| End bp | 1939948 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664557 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790827 |
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| Protein GI | 171058478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000175604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGGCG CCGCCATCCA TGACGTGGGC CGCCGTGTCG CGCAGGCCGC GCTGCTCGCG
CTGATCGCCC CCGCCGTGCA GGCCGCCGCC TTCAAGGCGG TGCTGCTGGT GCCCGACGAC
GACCCGCGCC TGGACCGCAA CCGCCTGGAG CGCGCCTACC TCGGCCACAC CGGCGGGCAG
GCGCTCGACG CGGTGCAGTC GGCGCTCAAG GAGTCGCGGC TCGAACTCGA GGCTGCCGGC
GCCAGCCTGA CGCTCGACAC CGTGGCCGTG GCCACGCCCG AGGCCGCGCG GGCGGCAGCG
GCGCAGGCCG AAAAAACCGG CGCCGCCTTC GTGCTGACCG ACCTCGGCCC GGCCGCCACG
CTGGCCGCCG CCGACGCGGT CAAGCTGCCG GTGCTCAACC TGAGCGACAG TTCTGACGCG
CTGCGCCAGA ACGACTGCCG GCCGCGCCTC TACCACCTGA TCCCCAGCGA GCGCATGCGC
GCCGACGCGC TGGCGCAGTC GCTGATGGCG CGCAAGTGGA CGCAGGTGCT GCTGCTGACC
GGCCCGAGCC CGGCCGACGC CCAGCGCAGC GCCACCGCGC AGGCGGCGAT CAAGCGTTAC
GGCCTCAAGC TCGCCGGCAG CAAGCCCTTC AAGCTGTCGG GCGACCCGCG CGAGCGCGAT
CTGGCCAACC CGCTGCTGCT CACGCAAGGC AGCTACGACG TCGTGTGGGT GGTCGACAGC
GACGGCGAAC TGGCGCGCAC GCTGCCCTAC CGCACCGTGC TGCCGCGCCC GGTGGTCGGC
GACGCCGGTC TGGTGGCGCT GGCCTGGCAT CCGCAGTACG AGCGTTACGG CGCGCCGCAG
GTCTCGCGTC GCTTCGCCCG TGAAGCGAAA CGGCCGATGG GCGGCCACGA ATGGGCCGCC
TGGATGGGCG GCAAGGCCAT CGCCGCGGCG GTGATCGAGG CGCCCAAGGG CCCGCTGGCC
GCCGTGCACA AGGCGTTCGC CGCGATCGAG GTCGACGGCT CCAAGGGCGT GCCGATGAGC
TTCCGCCCGT GGGACGGCCA GCTGCGCCAG CCGCTGCTGC TGACCGACGG CCAGGGTGTC
ATCGGTACCG CGCCGGCCGA CGGCGTGCTG CACCCGAAGA ACACGCTCGA CACGCTGGGT
GTGGACGCGC CTGAAAAGCT CTGCAAAGCC AGATGA
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| Protein sequence | MRGAAIHDVG RRVAQAALLA LIAPAVQAAA FKAVLLVPDD DPRLDRNRLE RAYLGHTGGQ
ALDAVQSALK ESRLELEAAG ASLTLDTVAV ATPEAARAAA AQAEKTGAAF VLTDLGPAAT
LAAADAVKLP VLNLSDSSDA LRQNDCRPRL YHLIPSERMR ADALAQSLMA RKWTQVLLLT
GPSPADAQRS ATAQAAIKRY GLKLAGSKPF KLSGDPRERD LANPLLLTQG SYDVVWVVDS
DGELARTLPY RTVLPRPVVG DAGLVALAWH PQYERYGAPQ VSRRFAREAK RPMGGHEWAA
WMGGKAIAAA VIEAPKGPLA AVHKAFAAIE VDGSKGVPMS FRPWDGQLRQ PLLLTDGQGV
IGTAPADGVL HPKNTLDTLG VDAPEKLCKA R
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