| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1792 |
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| Symbol | |
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| ID | 6163291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1936140 |
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| End bp | 1936982 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664554 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_001790824 |
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| Protein GI | 171058475 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000000635041 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGTGG TCGTGCTCAA GGGCGGTGAC GAGGCCGTGC CACTGGCCCA GTGCGTGCAG
TCGGGGCCGT CGCCGAGCCG CGCCGCCGGT GCGGCCGCCT TGTCGGGCGA CGGGCGGCAC
TGGGCCCTGC TCAACGTGTC GCCGGCGGTG GCCGAGCAGC TGGCTACCGA TGCTCGCCTG
CTGCGCCACC ACGGCCTGCC CGATGCCGCG GTGCGCACCG TCGTGCTGAC CGATGCGCAG
ATGGACCACG TCACCGGCCT GCTGAGCCTG CGCGACGGCC CGCCGATCCA CCTGTACGCC
ACGCCGGCGG TGTTCGAGGA ACTCACCACC TCGGTGCCGG TGCTGCCGAT GCTGCAGCAC
TACTGCGGCG TGCACTGGCA CGTGATCCCG GTGGCGGGCG AGTGCCGCAC GGCGGTGTTC
CACGTCGAGG GCCAGCCGTC GCTGGAGTTC ACCGCGGTCG CCACCGACGG CCCGTCGCCG
CGCCACAGCA TGCATTCGGC CGGCCCGGTG GTGGGCGAGA CCATCGCGCT GGCGGTGCTC
GATCTGGCCA CCGGCCAGCG CTTCTTCTGC GCCAGCAGCC TGGCGAGCGC CGGCGCGATG
GCGGTCGAGT GGATGCGCGA GGCCGATTGC GTGATGGTCG GCGACGAGCC CGACAGCACC
CTGAGCCGCT ACTCGCCCGA TGCGGCCAAC GACGCCTGGG CGCTGCTCGA CGGCGTGCGG
GCGCGCCGCA AGCTGCTGCT GGCCCACCCC GACGGCGCCG GCCCGCAGCG CCAGCCCGCG
CCCAGCGTGA TGGCGCGCTG GGGCCTCGAG CTGGCGTCCG ACCGGATGGA GATCGAGCTG
TGA
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| Protein sequence | MKVVVLKGGD EAVPLAQCVQ SGPSPSRAAG AAALSGDGRH WALLNVSPAV AEQLATDARL
LRHHGLPDAA VRTVVLTDAQ MDHVTGLLSL RDGPPIHLYA TPAVFEELTT SVPVLPMLQH
YCGVHWHVIP VAGECRTAVF HVEGQPSLEF TAVATDGPSP RHSMHSAGPV VGETIALAVL
DLATGQRFFC ASSLASAGAM AVEWMREADC VMVGDEPDST LSRYSPDAAN DAWALLDGVR
ARRKLLLAHP DGAGPQRQPA PSVMARWGLE LASDRMEIEL
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