| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1789 |
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| Symbol | |
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| ID | 6163288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1931702 |
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| End bp | 1932181 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664551 |
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| Product | cytochrome c550 |
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| Protein accession | YP_001790821 |
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| Protein GI | 171058472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000000264045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACGAG GAGACATTTT CAGGGCCGCC ATCTTGGCGA TGGCCTGCGC AGCCGTCGGC
ACCCTGGCGT CGGCACACGG TGACGTGACC CCTCAGTCGG TGGACACCAG CAGCCTGCCG
CAACTGGGCG CCGACTGGCG GCCCGAGAAC CCCTACCGCG CCCACGAGGA CGCGATCAAG
ATCGGCAGCT CGGCCTACAA CCAGAACTGC GCCCGCTGCC ACGGCCTGGA AGCGATCTCG
GGCGGCATCG CGCCGGATCT GCGCAAGCTC GACAACGACT GCTCCAACGT GAAGATCGCC
GCCAAGAAGG CCGCCTGCGT GAAGGAGATC GACGACTACT ACGCCACCAG CGTGCGGCGC
GGCAAGACCC GCAACGGCGC GGTCTACATG CCCCCGTTCG AAGGCATCCT GAGCCAGGAG
GCGGTCTGGT CGATCAAGGC CTACCTCGAG ACCCGGCGCG AAAAAACCGC TGTAAATTGA
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| Protein sequence | MARGDIFRAA ILAMACAAVG TLASAHGDVT PQSVDTSSLP QLGADWRPEN PYRAHEDAIK
IGSSAYNQNC ARCHGLEAIS GGIAPDLRKL DNDCSNVKIA AKKAACVKEI DDYYATSVRR
GKTRNGAVYM PPFEGILSQE AVWSIKAYLE TRREKTAVN
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