Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1786 |
Symbol | rpsU |
ID | 6161480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1929079 |
End bp | 1929291 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641664548 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_001790818 |
Protein GI | 171058469 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000177604 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACCA TCCGTGTCAA GGAAAACGAA CCGTTTGACG TTGCCCTGCG CCGCTTCAAG CGCACCATCG AAAAGCTGGG CCTGCTGACC GAACTGCGCG CACGCGAGTT CTACGAGAAG CCCACCGCAG AGCGCAAGCG CAAGAAGGCA GCCGCCGTCA AGCGCCACTA CAAGCGCGTG CGTTCGATGC AGCTGCCCAA GAAGCTGTAC TGA
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Protein sequence | MTTIRVKENE PFDVALRRFK RTIEKLGLLT ELRAREFYEK PTAERKRKKA AAVKRHYKRV RSMQLPKKLY
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