| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1786 |
|---|
| Symbol | rpsU |
|---|
| ID | 6161480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1929079 |
|---|
| End bp | 1929291 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641664548 |
|---|
| Product | 30S ribosomal protein S21 |
|---|
| Protein accession | YP_001790818 |
|---|
| Protein GI | 171058469 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0828] Ribosomal protein S21 |
|---|
| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0000000177604 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA TCCGTGTCAA GGAAAACGAA CCGTTTGACG TTGCCCTGCG CCGCTTCAAG
CGCACCATCG AAAAGCTGGG CCTGCTGACC GAACTGCGCG CACGCGAGTT CTACGAGAAG
CCCACCGCAG AGCGCAAGCG CAAGAAGGCA GCCGCCGTCA AGCGCCACTA CAAGCGCGTG
CGTTCGATGC AGCTGCCCAA GAAGCTGTAC TGA
|
|---|
| Protein sequence | MTTIRVKENE PFDVALRRFK RTIEKLGLLT ELRAREFYEK PTAERKRKKA AAVKRHYKRV
RSMQLPKKLY
|
|---|
| |