| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1783 |
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| Symbol | |
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| ID | 6161477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1926586 |
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| End bp | 1928091 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664545 |
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| Product | histidine kinase |
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| Protein accession | YP_001790815 |
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| Protein GI | 171058466 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000211372 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTGA GCGCGCTGCT TCGGCCCGGA GCCGGCGCCG ACGCCACCGG CCCGCGCCGC
CTGCGCAAGA AGATCCTGCT GCTGGCGGTG CTGCCGCTGG TGGCGTCGCT GCTGCTGATC
GCGCTGGCCG TGCGGCATCA GGCCCTGGAG CTGGCACAGC GCGAGCGCGC GCTGGTCGAA
TCGGCCTACA TGGCCAGCAA GGAGGCCGAG CTGCGTGGCT ACGTCGACCT CGCGCTCAGC
ATGGTGCGGC CGATCTACGA CTCCGGCCGC GACGACGCGG CGGCCAAGCA GGAGGCCGCG
CGCATCCTGG CCTCGCTCAG CTCCGGTGCC GGCGACGGCT ATTTCTTCGC CTACGACTTC
GACGGCCTGT GCATCGTGCT GCCGCCGCAG CCCGAGCTGG TCGGCACCAA CCTCTGGGAC
GTGCGCGACC GCGACGGCCG TCCGGTCGTG CAGGCGCTGA TCGCCAAGGC GCGCGAGGGC
CAGGGTTTCT TCCGCTACGT CTGGAACAAG CCCAGCATGC GCCAGGTCGC GCCCAAGCTC
GGCTACGTGG TGGGCCTGCC GCGCTGGGGC TGGATGATGG GCACCGGGCT CTACCTCGAC
GACATCCAGG TCACGCTCGA CCAGCTCGAG CGCCAGGGCC AGGCCAACAT CTGGGCCACC
ATGGCCTGGA TCGCCGGCAT CGCGCTGCTG GGCATCAGCC TGCTGTCGGC CTGCGCGCTG
GCGCTCAACC TCAGCGAATA CCGCGCCGCC GACGCCCAGC TGCAGCTGAT GGCGCACCAG
GTGGTGCAGT CGCAAGAGAA CGAACGCGCC CACCTGTCGC GCGAACTGCA CGACGGCACC
GGCCAGACGC TGGTGTCGAT CAAGCTGCTG ATGGACAGCG CCATCGGCCA CCTCAAGCGC
AACCTGCAGG CCCCGCCACC GACGCTCGAC AAGGCGCGCG AGCGCATCGA CGAGGCGCTC
AGCGAGGTGC GCACCCTCTC GCACCGCCTG CGCCCCACCG TGCTCGACAC CTTCGGCCTG
CCCGCGGCGC TGCGCTACCT GGGCGAGGAG TTCGCCGAAC ACGCCGAACT GGCGTTTTTC
ATGCGCCTGC GCGGGCCCGA ACAGACGCTG CCCGAAGACA TCAAGACGGT GCTGTTCCGC
ATCACGCAGG AGGCACTGAC CAACATCGAG CGCCACGCCC GTGCCAGCCG GGTCGACCTG
CGGCTGATCT TCGGCCCCGC CGGCGTGCGC CTGACGGTGC AGGACGACGG CGTGGGCTAC
GACACCCAGG CGCTGCAGCT CGATCCGCGC CGCGGCATCG GCCAGCGCAA CATGCGCGAG
CGCATGGCCT CGATCGGTGG CCAGCTCACG GTGCAATCGC AGCCCGGCTC GACCCGCGTC
ATCGCCCAGG TGCCGACCGC CGCCATCCGC CGCTTTGCGG CGGCCGAGCG CCAGAACGGC
ACCCCGGCCG ACGCCCAACA CCCCGGATCA GGAGACCGCA ACCATGCGCA TCGTGCTGGT
GGATGA
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| Protein sequence | MDLSALLRPG AGADATGPRR LRKKILLLAV LPLVASLLLI ALAVRHQALE LAQRERALVE
SAYMASKEAE LRGYVDLALS MVRPIYDSGR DDAAAKQEAA RILASLSSGA GDGYFFAYDF
DGLCIVLPPQ PELVGTNLWD VRDRDGRPVV QALIAKAREG QGFFRYVWNK PSMRQVAPKL
GYVVGLPRWG WMMGTGLYLD DIQVTLDQLE RQGQANIWAT MAWIAGIALL GISLLSACAL
ALNLSEYRAA DAQLQLMAHQ VVQSQENERA HLSRELHDGT GQTLVSIKLL MDSAIGHLKR
NLQAPPPTLD KARERIDEAL SEVRTLSHRL RPTVLDTFGL PAALRYLGEE FAEHAELAFF
MRLRGPEQTL PEDIKTVLFR ITQEALTNIE RHARASRVDL RLIFGPAGVR LTVQDDGVGY
DTQALQLDPR RGIGQRNMRE RMASIGGQLT VQSQPGSTRV IAQVPTAAIR RFAAAERQNG
TPADAQHPGS GDRNHAHRAG G
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