Gene Lcho_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1772 
Symbol 
ID6162926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1907078 
End bp1907422 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content77% 
IMG OID641664534 
Producthypothetical protein 
Protein accessionYP_001790804 
Protein GI171058455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000573033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCCC CGGCCCGCGT CATCGCCATC CACCCCGCCG CGCCATCCAA GCCGGCCTGG 
GGCCAGCCTT GCAACGGCTG CGGCGTCTGC TGCCTCAGCG AGCCCTGCCC GGTCGGCATG
CTGCTGAGCC GGCGCCGGCG CGGGGCCTGC GTCGCGCTGG TGTGGAGCGA GCCGGATGCG
CGCTACCGCT GCGGCCTGCT GGTGGCGCCG GCCGAACACC TGCCGGCCCT GCTGCGCCCG
GCCGCGCCGC GGCTGCAGAA GGTGGCGCGC CGTTTCATCG CCGCGGGCAT CGGCTGCGAC
TGCGACATCG AGTTCGAGGC GCCCGACGAC ACCGGCGCGC CCTGA
 
Protein sequence
MTAPARVIAI HPAAPSKPAW GQPCNGCGVC CLSEPCPVGM LLSRRRRGAC VALVWSEPDA 
RYRCGLLVAP AEHLPALLRP AAPRLQKVAR RFIAAGIGCD CDIEFEAPDD TGAP