| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1771 |
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| Symbol | |
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| ID | 6162925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1906316 |
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| End bp | 1907059 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664533 |
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| Product | peptidase M50 |
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| Protein accession | YP_001790803 |
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| Protein GI | 171058454 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000535238 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAGA TCCTGCTGCT GTTGCTGTCG GGCGCCAAGC TCGGCAAGCT GTTGACCACC
GGCGGCACGA TGCTGCTGTC GCTGGTGGCC TATGCCTTCA TCTTCGGCTG GCGTTATGCC
GCCGGTTTCG TGCTGCTGCT GTTCGTGCAC GAAGCCGGGC ATTACGTGGC GGCCCGACAG
CGTGGGCTGG ATGTCGGCGC ACCGACCTTC ATCCCCTTCG TCGGCGCCTG GATCGCGCTC
AAGCAGCTGC CGCACGACGC CGAGACCGAG GCCTACGTCG GCCTGGGCGG ACCGCTGATC
GGCACGCTCG GCGCGATCGT CTGCTTCTTC CTGGCGCGCA GCTGGGACGC GCCGTGGCTG
CTGGCGGTGG CCTACGCGGG CTTCTTCCTG AACCTGTTCA ACCTGATCCC GCTGTCGCCG
TTCGACGGCG GGCGCATCAC CGCGGTGCTG TCGCCGCGCA TCTGGCTGCT GGGCGTGCCG
ATCCTGGGCG CGCTGATCTG GTGGCGGCCC AGCCCGATGC TGCTGCTGGT GGCGCTGCTG
GCCGCGCCGC AGGTCTGGAA GGCCGTCACC TACCGGCGCG ACAGCGTCGA GGCGCAGACC
TACTACGCCG TCGACACCGC CACCAAGTGG CGCTACGGCC TGATCTACGT CGTGCTGACC
GCTTTCCTGG CGGTCATGAC GTTCGAGGTG CACGAGATGC TGCAGGCGCA GCGCCCGGCC
GCGGCGTCGA CCCCGGTGCT CTGA
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| Protein sequence | MIKILLLLLS GAKLGKLLTT GGTMLLSLVA YAFIFGWRYA AGFVLLLFVH EAGHYVAARQ
RGLDVGAPTF IPFVGAWIAL KQLPHDAETE AYVGLGGPLI GTLGAIVCFF LARSWDAPWL
LAVAYAGFFL NLFNLIPLSP FDGGRITAVL SPRIWLLGVP ILGALIWWRP SPMLLLVALL
AAPQVWKAVT YRRDSVEAQT YYAVDTATKW RYGLIYVVLT AFLAVMTFEV HEMLQAQRPA
AASTPVL
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