| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1767 |
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| Symbol | |
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| ID | 6163616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1900623 |
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| End bp | 1901642 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664529 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001790799 |
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| Protein GI | 171058450 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00963183 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGTCG ACGCCCAGAA CACCCCCGAC GACACGTTCC ACGACCTGCC GCCGTACACG
CCGAGCCGCC CCTCGACATC GCTGTTCGTG ACCCTGCGCG AGCGGCCCGC GCCGGTGGCC
GGGCCCGAGC AGCGGGCCGA TCCGCCGTAT GTGCGGCGCG CCCATCGGCT GCGTTACCAC
GTCCAGACCT GGGGCGAACC GGCGCTGGTC ACGCCCGAGC GGCCGGCGCT GATCCTGCTG
CACGGCTGGA TGGACGTCGG TGCGTCGTTC CAGTTCATGG TCGATGCGCT GACGCAGCCG
CGCTACATCC TGGCGCTCGA CTGGCGCGGT TTCGGCCTGA CCGAAGCGCC GCCGGCCGAC
AGCTACTGGT TCCCCGACTA CCTGGCCGAC CTCGACGCCC TGCTCGACAC GCTGCTGCCC
GGCCAGGCGA TCGACCTGGT CGGCCACAGC ATGGGCGGCA ACGTGGCGAT GCTCTACGCC
GGCATCCGGC CCGCGCGCAT CCGCCGACTC GTCAACCTCG AGGGTTTCGG CATGCCGCCG
ACCCGCGCGG CGATGGCGCC GACGCGCTAC GAACGCTGGC TCGACGCCCT CAAGTCGCCG
CCGCAACTGC GCAGCTACCC GACCCTCGAA GCGGTGGCGC GGCGGCTGCG CCTGAACAAC
CCGCGCCTGC AGCCGGCTCA CGCGCTCTGG CTGGCCGGCC ACTGGTCGCG CGCCGACGAC
AGCGGCCAGT ACCACCTGCT GGCCGACGCC GCGCACAAGC GCATCAACCC GGTGCTGGCG
CGCCAGGACG AGGCGGTCGC CTGCTGGCGG CGCATCAGCG CGCCGGTGCT GTGGGCCGAA
GGCGCGCAGA CGCGGCTGTT CGACCTGTGG GCCGAGGCCT ATCCGCGCGA CGACTTCGAG
ACCCGCCTGG CCGAGGTGCA GCGCCTGCGC CGGGTGCTGA TCGACGACTG CGGCCACATG
CTGCATCACG ACCAGCCGGA TGCGCTGGCC GCGCACATCG AGGCGTTCCT GATGCCGTGA
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| Protein sequence | MPVDAQNTPD DTFHDLPPYT PSRPSTSLFV TLRERPAPVA GPEQRADPPY VRRAHRLRYH
VQTWGEPALV TPERPALILL HGWMDVGASF QFMVDALTQP RYILALDWRG FGLTEAPPAD
SYWFPDYLAD LDALLDTLLP GQAIDLVGHS MGGNVAMLYA GIRPARIRRL VNLEGFGMPP
TRAAMAPTRY ERWLDALKSP PQLRSYPTLE AVARRLRLNN PRLQPAHALW LAGHWSRADD
SGQYHLLADA AHKRINPVLA RQDEAVACWR RISAPVLWAE GAQTRLFDLW AEAYPRDDFE
TRLAEVQRLR RVLIDDCGHM LHHDQPDALA AHIEAFLMP
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