Gene Lcho_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1763 
Symbol 
ID6162060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1894920 
End bp1895945 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID641664525 
Productfructose-1,6-bisphosphatase 
Protein accessionYP_001790795 
Protein GI171058446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0158] Fructose-1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0106936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GGATCAGCCT GACTCAGTTC CTGGTCGAAC AGCAACGCCA GCACGGCCGC 
ATCCCGGCCC AGCTGCGGCT GCTGATCGAG GTGGTGGCTC GCGCGTGCAA GCGCATCGCC
ATCTCGGTCA ACAAGGGCGC GCTCGGCGAG GTGCTGGGCA GCGCCGGCAG CGAGAACGTG
CAGGGCGAGG TGCAGAAGAA GCTCGACATC ATCTCCAACG AGGTGCTGAT CGAGGCCAAC
GAATGGGGCG GCCACCTGGC GGCAATGGCC AGCGAGGAGA TGGACTCGAT CCACGTCGTG
CCCAACCGCT ACCCGCAGGG CGAATACATG CTGCTGTTCG ACCCGCTCGA CGGCAGCTCG
AACATCGACG TCAACGTCTC GATCGGCACC ATCTTCTCGG TGCTGCGCAA GGTCGGCCAC
CAGCACGGCG TCAGCGAAGA GGATTTCCTG CAGCCGGGCA AGTTCCAGGC GGCGGCCGGC
TACTGCGTCT ACGGCCCGCA GACCACGCTG GTGCTGACGG TGGGCGACGG CGTGGCGGTG
TTCACGCTCG ACCGCGAGAC CGGCAGCTTC GTGCTGACGC AGTCCAACCT GCAGATCCCG
GCCGACACCC ACGAGTTCGC GATCAACGCG TCGAACCATC GCCACTGGGC GCCGCCGATG
AAGCGCTACA TCGACGAGTG CCTGGCCGGC CGCGAGGGCC CGCGAGGCAA GGACTTCAAC
ATGCGCTGGG TCGGCAGCAT GGTGGCCGAC GTGCACCGCA TCCTGACGCG TGGCGGCATC
TTCCTGTACC CGTGGGACCA GCGCGAGCCC GACAAGCCGG GCAAGCTGCG CCTGATGTAC
GAGGCCAACC CGATGGCCTT CCTGGTCGAG CAGGCCGGCG GTGCCGCCAC CAACGGCGAG
CAGCGCATCA TGGACCTGAT GCCCGGCAAG CTGCACGAGC GCGTCAGCGT GATGATGGGC
TCGAAGAACG AGGTCGAGCG CGTCAGCCAG TACCACCGCG AGCACCGCGA GGCGGCGGGC
CACTGA
 
Protein sequence
MSKRISLTQF LVEQQRQHGR IPAQLRLLIE VVARACKRIA ISVNKGALGE VLGSAGSENV 
QGEVQKKLDI ISNEVLIEAN EWGGHLAAMA SEEMDSIHVV PNRYPQGEYM LLFDPLDGSS
NIDVNVSIGT IFSVLRKVGH QHGVSEEDFL QPGKFQAAAG YCVYGPQTTL VLTVGDGVAV
FTLDRETGSF VLTQSNLQIP ADTHEFAINA SNHRHWAPPM KRYIDECLAG REGPRGKDFN
MRWVGSMVAD VHRILTRGGI FLYPWDQREP DKPGKLRLMY EANPMAFLVE QAGGAATNGE
QRIMDLMPGK LHERVSVMMG SKNEVERVSQ YHREHREAAG H