Gene Lcho_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1752 
Symbol 
ID6161291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1872469 
End bp1872954 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID641664512 
ProductMerR family transcriptional regulator 
Protein accessionYP_001790784 
Protein GI171058435 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0206721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC CTCTCCCGGC CATACCGCCC AAGCGTTACT TCACCATCGG TGAAGTGAGC 
GAGTTGTGTG GCGTCAAGCC GTATGTGCTG CGCTACTGGG AGCAGGAATT CACCCAACTG 
CGGCCGATGA AACGGCGCGG CAACCGGCGT TATTACCAGC ACCACGAGGT GCTCCTGATC 
CGCCGTATCC GCGACCTGCT CTACGAGCAG GGTTTCACCA TCAGCGGGGC ACGTAATCGT 
CTGGCGGAAT TGGGCGCGCT GAATGCGCAC TCGTCGCACC TCGACGACTT CGAGGACGAA 
GTCTCCGAGC GCGAACTGGG CTTGTCGCCC GAACGCGTTC CGGCCCCGCC CGTACCGACC 
CCAGCGAGTG CGGCGCTCGT GATCAAGCCT GCCGATGCGT CGACTGCGGT CGCTCCTGCT 
GGCCGGGTGC AGTCCATACG CGATGAACTC TTGTCGATCC GAAGTCTGCT TGAGGTCGAT 
TTCTAA
 
Protein sequence
MENPLPAIPP KRYFTIGEVS ELCGVKPYVL RYWEQEFTQL RPMKRRGNRR YYQHHEVLLI 
RRIRDLLYEQ GFTISGARNR LAELGALNAH SSHLDDFEDE VSERELGLSP ERVPAPPVPT 
PASAALVIKP ADASTAVAPA GRVQSIRDEL LSIRSLLEVD F