| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1750 |
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| Symbol | pheT |
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| ID | 6161342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1869598 |
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| End bp | 1872048 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664510 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001790782 |
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| Protein GI | 171058433 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0199771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCC CCGAATCGTG GTTGCGCGAG TTCTGCAACC CTGAACTGAG CAGCGATGCG
CTGGCCCATC TGCTGACGAT GTCCGGCATG GAAGTCGAAG AGCAGCGCCC CGTCGCGCCC
GCCTTCCACG GCATCGTCGT CGCCGAGATC CTCGAAGCCG AACAGCACCC GAACGCCGAC
AAGCTGCGCG TGTGCACGGT CGATGCCGGT CCGCACAGCC CGGACGGCCC GCTGCAGATC
GTCTGCGGTG CCCCCAACGC GCGTGCTGGC ATCCGCATTC CGCTCGCCAC CATCGGCGCC
GAACTGCCGC CGGGCGAGGA CGGCAAGCCG TTCAAGATCG GCAAGGGCAA GCTGCGCGGC
GTCGAGAGCT TCGGCATGCT GTGCTCGGCG CGCGAGCTCA AGCTGTCCGA GGACCACGGC
GGCCTGCTCG AACTGCCGGC CGACGCGCCG CTCGGCCAGG ACATCCGCCA GTTCCTGAAC
CTCGACGACG CGCTGTTCAC GCTCAAGCTC ACGCCCAATC TGGGCCACTG CCTGAGCGTC
TACGGCGTGG CGCGCGAAGT CTCGGCCCTG ACCGGCTCGC CGCTGATCAC GCCGGCGATC
GAGCCGGTTC GGCCCAGCCA CGACGCCCGC CTGCCGGTGC GCATCGAAGC GCCCGACCTG
TGCGGTCGCT TCTCGGGCCG CATCGTGCGC GGCATCAACC CGCAGGCCAG GACACCCGCG
TGGATGGTCG AGCGCCTGGC GCGCTGCGGC CAGCGTTCGG TCAGCGCGCT GGTCGACATC
TCGAACTACG TGATGTTCGA ATACGGCCGG CCGTCGCACA TCTTCGACCT CGACAAGATC
CAGGGCGGCC TGGTCGTGCG CTGGGGCCGC GCCGGCGAAA CGCTCAAGCT GCTCAACGGC
AACACCGTCA CGCTCGACGA GCAGGTCGGC GTGATCGCCG ACGAACATGC CGGCCAGCAG
TCGGTCGAGT CGCTCGCCGG CATCATGGGC GGCGACACCA CCGCGGTGAG CGACGACACC
CGCAACGTCT ACGTCGAAGC CGCCTTCTGG TGGCCCGAGG CGGTGGCCGG GCGTTCGCGC
CGCTACAACT TTTCGACCGA CGCCGGCCAT CGCTTCGAGC GCGGTGTCGA TCCGGCGCAG
ACGGTCGAGC ACATCGAGCG CATCACCGCG CTGATCGTGC AGATCTGCGG CGGCGCCGAC
ACGGTCTGCG GCCCGGTCGA CGACCAGACC GCGCGCCTGC CCGAGCGTCA GCCAGTGGCT
CTGCGCGTGG CGCGGGCGGC CAAGGTGATC GGCATGCCGT TGACACAGGT GCAGTGCGCC
GGCGTGTTCG AGCGTCTGGG CTTGCCGTTC ACCGCGGGTG AGGGCGTCCT GACCGTGACG
CCGCCGAGCT GGCGTTTCGA CCTGCAGATC GAGGAAGATC TGATCGAGGA GGTGATCCGC
GTCATCGGGT TCGACCAGTT GCCGCTGACG CCGCCGCTGG CGCCCGTGAC GGCGCGCGTG
CGCAGCGAGT CGCAGCGTGG CAGCCACGCG CTGCGCCGCA CCGTGGCCGC GCTCGATTAC
CAGGAAACGA TCAACTTCAG CTTCGTCGAG GAACGCTGGG AGACCGAACT GGCCGGCAAC
GATCAGCCGA TCCGCCTGCT CAACCCGATT GCCGCACCGC TGTCGGTGAT GCGCTCCAGC
TTGATCGGCA GCCTGATCCA GGTGCTGCGC CACAACCTGA CACGGCGTGC GCCGCGGGTT
CGGGTGTTCG AACTCGGCCG CGTCTTCAAG CGCGATGCCT CGGTGCAGAC CAGCGAGCAG
TCGGTCGTGG GCATCGATCA GCCCTTGCGT CTCGCGGGTC TGGCCTGGGG CCCGGCAGAC
AGCGTGCAGT GGGGCAGCAA GGAGCGCGCG GTCGATTTCT TCGACGTCAA GGGTGACGTG
CAGGCCTTGC TGGCCCCGCG TGTGGCGCGC TTTGTCGCGG CCGAACATCC GGCGATGCAT
CCGGGCCGCT GTGCCCGGGT GGAAGTCGAT GGCACGGTCA TCGGTCACGT CGGTGAACTG
CACCCGCGCT GGCGCCAGGC CTATGAGTTG CCGAGCGCAC CGGTGCTGTT CGAACTCGAT
CTCGCCAGCC TGCTCGCGCG CGAGGTGCCC GTTTACGTGC CGGTGCCGCG CCAGCAGACC
GTGACACGCG ATCTGGCGCT GATCGTCAAG GACAGCGTGC CCCATGACGA TGTCATCGAC
ACGATCATGC AAGCGCCCAC CGGCGGCCTG ATGCGCAGCG CGCGGCTGTT CGACGTCTAC
CGGCCGACCG CGCAGACCAC CGGTCTGGCC GAGGGTGAAC GCAGCCTGGC GATCCGCCTC
GAGCTGCTGG ATGACGAAAC GCCGCTCACC GATGCGCGCA GCGATGCGGC CATCCAAGCC
GTGATCGATG CGGTGCAATC CGGTCTCGGC GCCCGGTTGC GCGGCGCCTG A
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| Protein sequence | MQFPESWLRE FCNPELSSDA LAHLLTMSGM EVEEQRPVAP AFHGIVVAEI LEAEQHPNAD
KLRVCTVDAG PHSPDGPLQI VCGAPNARAG IRIPLATIGA ELPPGEDGKP FKIGKGKLRG
VESFGMLCSA RELKLSEDHG GLLELPADAP LGQDIRQFLN LDDALFTLKL TPNLGHCLSV
YGVAREVSAL TGSPLITPAI EPVRPSHDAR LPVRIEAPDL CGRFSGRIVR GINPQARTPA
WMVERLARCG QRSVSALVDI SNYVMFEYGR PSHIFDLDKI QGGLVVRWGR AGETLKLLNG
NTVTLDEQVG VIADEHAGQQ SVESLAGIMG GDTTAVSDDT RNVYVEAAFW WPEAVAGRSR
RYNFSTDAGH RFERGVDPAQ TVEHIERITA LIVQICGGAD TVCGPVDDQT ARLPERQPVA
LRVARAAKVI GMPLTQVQCA GVFERLGLPF TAGEGVLTVT PPSWRFDLQI EEDLIEEVIR
VIGFDQLPLT PPLAPVTARV RSESQRGSHA LRRTVAALDY QETINFSFVE ERWETELAGN
DQPIRLLNPI AAPLSVMRSS LIGSLIQVLR HNLTRRAPRV RVFELGRVFK RDASVQTSEQ
SVVGIDQPLR LAGLAWGPAD SVQWGSKERA VDFFDVKGDV QALLAPRVAR FVAAEHPAMH
PGRCARVEVD GTVIGHVGEL HPRWRQAYEL PSAPVLFELD LASLLAREVP VYVPVPRQQT
VTRDLALIVK DSVPHDDVID TIMQAPTGGL MRSARLFDVY RPTAQTTGLA EGERSLAIRL
ELLDDETPLT DARSDAAIQA VIDAVQSGLG ARLRGA
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