| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1745 |
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| Symbol | |
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| ID | 6161337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1865126 |
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| End bp | 1867039 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641664505 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001790777 |
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| Protein GI | 171058428 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00239329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCAA TTCAACTGCC CGACGGTTCT CGCCGCGAGT TCGATGGCCC GGTGACGGTG
GCCGAAGTGG CCGCGTCGAT CGGCGCCGGC CTGGCCAAGG CGGCGTTGGC CGGACGCATC
GGCACGGGCG ATGCCGCCCG CCTGGTCGAC ACCAGCCATC GCATCGAGGC CGACGAGGCG
CTGTCGATCA TCACGGCCAA GGACGCCGCC GGGCTGGACG TCATCCGCCA CTCGACCGCG
CACCTGCTGG CATACGCGGT CAAGGAGCTG TTTCCCGATG CGCAGGTCAC GATCGGCCCG
ACCATCGAGA ACGGTTTCTT CTACGACTTC TCGTACAAGC GCCCGTTCAC GCCCGACGAT
CTGGCGGCGA TCGAAAAGAA GATGGGCGAT CTCGCCGCCA AGGACGAACC GGTGGTGCGC
AGCGTCATGC CGCGCGACGA GGCGGTGTCC TACTTCAAGT CGATCGGCGA AGCCTACAAG
GCAGAAATCA TCGAGAGCAT CCCGGCCGAC CAGGCGGTGT CGCTCTACGC CGAAGGCAAG
TTCACCGACC TGTGCCGCGG CCCGCACGTG CCGAGCACGG GCAAGCTGAA ATTCTTCAAG
CTGATGAAGG TGGCCGGCGC CTACTGGCGT GGCGATCACC GCAACGAGAT GCTGCAGCGC
ATCTACGGCA CGGCCTGGGC GACCAAGGAC GACCTGCAGA AGTACCTGGT GATGCTCGAA
GAGGCCGAGA AACGCGATCA CCGCAAGCTC GGTCGCGAAC TCGACCTGTT CCACATCGAC
GAGCACGCAC CGGGCGTGGT GTTCTGGCAT CCCAAGGGCT GGACGGTCTG GCAGCAGGTC
GAGCAGTACA TGCGCCGGGT CTATCGCGAC AACGGCTACC AGGAGGTCAA GGGGCCGCAG
ATCCTCGACA AGGGGCTGTG GGAGAAGACC GGCCACTGGG ACAAGTACCG CGACAACATG
TTCACGACCG AATCGGAGAA GCGCGACTAC GCGCTCAAGC CGATGAACTG CCCCGGTCAC
ATCCTGATCT TCAAGCAGGG CATCAAGAGC TACCGGGACC TGCCGCTGCG CTACGGCGAG
TTCGGCCAGT GCCATCGCAA CGAGCCCAGC GGCGGCCTGC ACGGCATCAT GCGGGTGCGC
GGCTTCACGC AGGACGACGG TCACATCTTC TGCACCGAAG ACCAGATCCT GCCCGAGTGC
GATGCCTTCA CCACGCTGCT GCAGAAGGTC TACGCCGACT TCGGCTTCAC CGAGATTCTG
TACAAGGTGG CGACGCGCCC TGAAAAGCGC ATCGGCTCCG ACGAACTCTG GGACAAGGCC
GAAGCGGCAC TGATCGCCAG CCTGCGCAAT TCGGGTTGCG AGTTCGAGAT CTCGCCGGGC
GAGGGCGCGT TCTACGGCCC GAAGGTGGAG TACACGCTCA AGGATGCGCT GGGTCGCCAC
TGGCAGTGCG GCACGATCCA GGTCGATTTC TCGTTGCCCG AGCGCCTGGA TGCCGAGTAC
GTGGCCGAGT CCGGCGAGCG CCTGCACCCC GTGATGCTGC ACCGGGCCAT CCTTGGCAGC
CTCGAGCGTT TCATCGGTAT CCTCATCGAG GAACACGCCG GCGCCTTGCC GTTCTGGCTG
GCTCCGACCC AGGTGAGCGT GCTCAATATC ACCGACGGAC AGGCCGACTA CGCCCGTGAC
GTGGCGCGAT CGCTGCAAAA ACAAGGGCTT AGGGTAGCGC TGGACCTGCG CAACGAAAAA
ATCACGTATA AAATACGCGA GCATTCGTTG CAAAAGGTTC CGTACCTGAT CGTTGTCGGT
GACAAGGAGC GGGCATCCGG GGCCGTTGCA GTGCGCGCCA GAGGCAATCA GGACCTCGGT
GTGATGGCCC TGGAGGCCTT CTCCCAGAAG CTCGCTGCTG AACTTGCCAC CTGA
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| Protein sequence | MIAIQLPDGS RREFDGPVTV AEVAASIGAG LAKAALAGRI GTGDAARLVD TSHRIEADEA
LSIITAKDAA GLDVIRHSTA HLLAYAVKEL FPDAQVTIGP TIENGFFYDF SYKRPFTPDD
LAAIEKKMGD LAAKDEPVVR SVMPRDEAVS YFKSIGEAYK AEIIESIPAD QAVSLYAEGK
FTDLCRGPHV PSTGKLKFFK LMKVAGAYWR GDHRNEMLQR IYGTAWATKD DLQKYLVMLE
EAEKRDHRKL GRELDLFHID EHAPGVVFWH PKGWTVWQQV EQYMRRVYRD NGYQEVKGPQ
ILDKGLWEKT GHWDKYRDNM FTTESEKRDY ALKPMNCPGH ILIFKQGIKS YRDLPLRYGE
FGQCHRNEPS GGLHGIMRVR GFTQDDGHIF CTEDQILPEC DAFTTLLQKV YADFGFTEIL
YKVATRPEKR IGSDELWDKA EAALIASLRN SGCEFEISPG EGAFYGPKVE YTLKDALGRH
WQCGTIQVDF SLPERLDAEY VAESGERLHP VMLHRAILGS LERFIGILIE EHAGALPFWL
APTQVSVLNI TDGQADYARD VARSLQKQGL RVALDLRNEK ITYKIREHSL QKVPYLIVVG
DKERASGAVA VRARGNQDLG VMALEAFSQK LAAELAT
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