| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1744 |
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| Symbol | |
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| ID | 6163281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1863526 |
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| End bp | 1864842 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641664504 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001790776 |
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| Protein GI | 171058427 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000180609 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGCC TGACCCGCGA ACAACAGATC GCCGCCCTGG AAAAAGACTG GGCCGAGAAC
CCCCGCTGGA AGCTGGTGAA GCGCGGCTAC AGCGCCGCTG ACGTCGTGCG CCTGCGCGGC
AGCATGCAGC CCGAGTACAC GCTGGCCAAG ATGGGCGCCG AAAAGCTGTG GGACAAGGTC
AACGGCGGCG CCAAGAAGGG CTACGTGAAC GCGTTCGGCG CGATCACCGC CGGTCAGGCG
ATGCAACAGG CCAAGGCCGG CCTGGAAGCC GTGTACCTGT CGGGCTGGCA GGTCGCCGCC
GACGGCAACA CCTCCGAAAC CATGTACCCC GACCAGTCGC TGTATGCGTA CGACTCGGTG
CCGACCATGG TGCGCCGCAT CAACAACACC TTCAAGCGCG CTGACGAGAT CCAGTGGGGC
CGTGGCATCA ACCCGGGCGA TGAAGGTTTC GTCGACTACT TCCTGCCGAT CGTCGCTGAC
GCGGAAGCCG GTTTCGGCGG CGTGCTGAAC GCCTTCGAAC TGATGAAGAA CATGATCGCG
TCGGGCGCTG CCGGCGTCCA CTTCGAAGAC CAGCTCGCCG CGGTCAAGAA GTGCGGTCAC
ATGGGTGGCA AGGTGCTGGT TCCGACCCGC GAAGCCGTCG AGAAGCTGAT CGCCGCCCGG
TTCGCCGCTG ACGTCATGGG CGTGCCGACC ATCGTGCTGG CCCGTACCGA CGCCGAAGCG
GCCAACCTGC TGACCAGTGA TTGCGACGCC AACGACCAGC CGTTCGTCAC CGGCGAGCGT
ACGCAAGAGG GCTTCTACCG CGTCAAGAAC GGCCTGGAGC AGGCCATCAG CCGCGGCATC
GCCTACGCGC CGTACGCCGA CCTGGTGTGG TGCGAAACCG GCGTGCCCGA CATCGGCTTC
GCCCGTGAAT TCGCGCAAGC CGTGCACGGT GCATGCCCGG GCAAGCTGCT GAGCTACAAC
TGCTCGCCGT CGTTCAACTG GAAGAAGAAC CTGAACGACA GCCAGATCGC CGCCTTCCAG
GAAGAGCTGA GCGCGCTGGG CTACAAGTAC CAGTTCATCA CGCTGGCCGG CATCCACATC
AACTGGTACA ACACCTTCCA GTTCGCCCAC TCCTACGCCC GCGGCGAAGG CATGAAGCAC
TACGTGGAAA TGGTCCAGGA GCAGGAATTC GCTGCGCGCG ACAAGGGTTA CACCTTCGTG
TCGCACCAGC AGGAAGTCGG CGCTGGCTAC TTCGACGACG TCACCACCGT GATCCAGGGC
GGCTCGTCCA GCGTCAAGGC GCTGACCGGC TCGACCGAAG AAGAACAGTT CCACTGA
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| Protein sequence | MSSLTREQQI AALEKDWAEN PRWKLVKRGY SAADVVRLRG SMQPEYTLAK MGAEKLWDKV
NGGAKKGYVN AFGAITAGQA MQQAKAGLEA VYLSGWQVAA DGNTSETMYP DQSLYAYDSV
PTMVRRINNT FKRADEIQWG RGINPGDEGF VDYFLPIVAD AEAGFGGVLN AFELMKNMIA
SGAAGVHFED QLAAVKKCGH MGGKVLVPTR EAVEKLIAAR FAADVMGVPT IVLARTDAEA
ANLLTSDCDA NDQPFVTGER TQEGFYRVKN GLEQAISRGI AYAPYADLVW CETGVPDIGF
AREFAQAVHG ACPGKLLSYN CSPSFNWKKN LNDSQIAAFQ EELSALGYKY QFITLAGIHI
NWYNTFQFAH SYARGEGMKH YVEMVQEQEF AARDKGYTFV SHQQEVGAGY FDDVTTVIQG
GSSSVKALTG STEEEQFH
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