| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1742 |
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| Symbol | |
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| ID | 6163279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1861180 |
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| End bp | 1862505 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664502 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_001790774 |
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| Protein GI | 171058425 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000372034 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCACG AGATGCCCGA CGCCAGTCCG ATGGACGCCT ACTGGATGCC GTTCACCGCC
AACCGCCAGT TCAAGCGCGC GCCGCGCCTG CTGGTCAAGG CCAGCGGCAT GCACTACTGG
AGTGACGACG GCCGCCAGAT CCTCGACGGC GTGGCCGGCC TGTGGTGCGT CAACGCCGGC
CACGCCCGGC CGAAGATCGT CCAAGCCATC CAGCAGCAGG CCGCCGAGAT GGATTTCGCG
CCGCCGTTCC AGATGGCCCA CCCGAAGGCC TTCGAGCTGG CCGACGCATT GACCCGGCTG
ATGCCGGCCG GACTCAACCG GGTGTTCTTC ACCAACTCGG GCTCCGAGTC GGTCGAGACC
GCGCTGAAGA TCGCGCTGGC CTACCACCGC GCCCGCGGCG ACGGCACGCG CACCCGGCTG
ATCGGCCGCG AGCGGGGCTA CCACGGCGTC AACTTCGGCG GCATCTCGGT GGGTGGCATC
GTCGGCAACC GCAAGGTCTT CGGCCCGATG CTCGGCGGCG TCGACCACCT GCGCCACACC
CACGACCCGG CGCGCAACGC CTACAGCGTC GGCCAGCCCG CACACGGCGC CGACCTGGCC
GACGACCTCG AGCGCCTGGT CGCGCTGCAC GACGCCTCGA CCATCGCCGC GGTGATCGTC
GAGCCTGTGG CCGGCTCGAC CGGCGTGCTG GTGCCGCCCA CCGGCTACCT GCAGCGCCTG
CGCCAGATCT GCGACAAGCA CGGCATCCTG CTGATCTTCG ACGAGGTCAT CACCGGTTTC
GGCCGCACCG GCCAGGCGTT CGCGGCACAT ACCTTCGGCG TCACGCCCGA CCTGATGACG
GTGGCCAAGG GCCTCACCAA CGGCTGCGTG CCGATGGGCG CGGTGATCGC CAGGCAGGCC
ATCCACGACA CCTTCATGAG CGGGCCCGAG CACCTGATCG AGTTCCCGCA CGGTTACACC
TACTCGGCCC ACCCGCTGGC CTGCGCCGCC GGCCTGGGCA CGCTGGCAAC CTATGCCGAC
GAAGGCCTGC TGACACGCGC CGGCGAGCTG CAAGGCTACT TCGCCGAGTC GCTGCACACG
CTGCGCGGTG CGCCGCACGT GATCGACATC CGCAACATCG GCCTGGTGGG CGGCATCGAG
CTGGCGTCGA TCCCGGGAGA ACCGGGCAAG CGCGCGTTCA ACGTGTTCCT CGACTGCTTC
GAGCGCGGCC TGCTGGTGCG CACCACCGGC GACACGATCG CGCTGTCGCC GCCGCTGATC
ATCGAGCGCG CCCAGATCGA CCAGATCGTC GGCACGATCG CCGACGCCCT CAAGCGCACA
GCCTGA
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| Protein sequence | MPHEMPDASP MDAYWMPFTA NRQFKRAPRL LVKASGMHYW SDDGRQILDG VAGLWCVNAG
HARPKIVQAI QQQAAEMDFA PPFQMAHPKA FELADALTRL MPAGLNRVFF TNSGSESVET
ALKIALAYHR ARGDGTRTRL IGRERGYHGV NFGGISVGGI VGNRKVFGPM LGGVDHLRHT
HDPARNAYSV GQPAHGADLA DDLERLVALH DASTIAAVIV EPVAGSTGVL VPPTGYLQRL
RQICDKHGIL LIFDEVITGF GRTGQAFAAH TFGVTPDLMT VAKGLTNGCV PMGAVIARQA
IHDTFMSGPE HLIEFPHGYT YSAHPLACAA GLGTLATYAD EGLLTRAGEL QGYFAESLHT
LRGAPHVIDI RNIGLVGGIE LASIPGEPGK RAFNVFLDCF ERGLLVRTTG DTIALSPPLI
IERAQIDQIV GTIADALKRT A
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