| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1726 |
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| Symbol | |
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| ID | 6162501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1842363 |
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| End bp | 1843364 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664486 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001790758 |
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| Protein GI | 171058409 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000241877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCTC CTACCGTCGT GATCGTGACC CCCGCGCTGG CCGCTGCCAA CAACGGCAAC
TGGCAGACCG CGCGCCGCTG GGCCGGCTTT CTGGCCGGTC ATTATCGAGT CCGGCTGACC
GATGCCTGGG ACGGCGGCGA CGAGGATCTG ATGATCGCGC TGCACGCGCG CCGCTCGGCT
GCGTCGGTCG CTGCCTGGCG TGCCGCCGCG CCGTGCCGCC CGCTGGTGCT GGTGCTGACC
GGCACCGATC TCTATCGCGA TCTGCAGCAT GACGCCAGCG CGCAACGTTC GGTGGAACGG
GCCGACCGCC TGGTGGTGCT CAACGAGATG GGTCTGGCCG AGCTGCCGCC CGGCGCGCGG
GCCAAGGGCG TGATCTGCCT GCAATCCAGC CCGGCGCGCA AACCGCGCGC CAAGACCGTC
CGCCACCTGC GTGCGCTGAT GGTGGGCCAC CTGCGCGAGG AAAAGTCGCC GCGCACCTAT
TTCGACGCCG CCCGGCAGCT GGCCGGCCGC AGCGACATCC TGCTCGACCA CATCGGCGGC
GCGCTCGACG CCGCGCTGGC CGACCAGGCC CGCCAGCTGG CGGCCGACTG CCCGCACTAC
CGCTGGCTCG GCGCGCTGGC GCACGAACGC ACCCGCGCGC GCATCCAGGC CGCCCACGTG
CTGGTACACG CCAGCCGCAT GGAGGGCGGC GCGCACGTGG TGATCGAGGC CGTGACCAGC
GGCACGCCGG TGATCGCCTC GCGCATCAGC GGCAACGTCG GCCTGCTCGG CGCCGACTAC
GGCGGCTACT TCGACTGGGG CGACGCAGCC GGCCTGGCAA CCCTGCTGGC GCAACTGCGC
GACGATGCCG CTAAGCTCGC GGCCCTGCAG GCGCAATGCG CCGCTCGCGC GCCGCTTTTT
GCCCCCGACC ACGAGCGGCG CACGCTGCTC GACCTGCTGG CGTCGACCCT CGCCTCGACG
CCCGCGCTGA CCGATCACAC ACCCGATTCA ACCCCCGCAT GA
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| Protein sequence | MKAPTVVIVT PALAAANNGN WQTARRWAGF LAGHYRVRLT DAWDGGDEDL MIALHARRSA
ASVAAWRAAA PCRPLVLVLT GTDLYRDLQH DASAQRSVER ADRLVVLNEM GLAELPPGAR
AKGVICLQSS PARKPRAKTV RHLRALMVGH LREEKSPRTY FDAARQLAGR SDILLDHIGG
ALDAALADQA RQLAADCPHY RWLGALAHER TRARIQAAHV LVHASRMEGG AHVVIEAVTS
GTPVIASRIS GNVGLLGADY GGYFDWGDAA GLATLLAQLR DDAAKLAALQ AQCAARAPLF
APDHERRTLL DLLASTLAST PALTDHTPDS TPA
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