| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1721 |
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| Symbol | |
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| ID | 6162496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1837377 |
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| End bp | 1838225 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664481 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001790753 |
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| Protein GI | 171058404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000186214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACGCCG TCGTGCCCCG TCGCGCCGCG CCCGGCGTGC CATCGCGCGA TCCGGCCTGG
CTGGCGCGAC TGTTCTGGAT CGGCGCGGCG CTGGTGCTGC TGTGGCCGCT GGGCGTGGCC
ACCGAGTTCC GGCCCTGGGT GCTGCTGGAA CCCGACAACC TCAAGCTCAG CGCCGGTTTC
ATCGGCAGCT TCTTCCCGCC GGCGGTCGAG CCCGATTTCC TGCTGATGGT GGCGCGCGAG
ACCTGGCGCA CGGTCGCCAT CGCCACCGCC GGCATCTCGC TGGCGCTGCT GCTGGCACTG
CCGCTGACGC TGCTGTCGAC GCGTGCGCTG TCGATCTCGG CGCTGTCGGG GCGCATGGCG
CGGCTGCCGT TCTGGATCCG CCAGACGCTG CGTGGCGTGA TGATCGTGCT GCGCAGCGTG
CCCGAGCTGG TCTGGGCGCT GGTGTTCGTG CGGGTGGTCG GCCTCGGCCC CACCGCCGGC
GTGCTGGCGA TCGCGCTGAC CTACGGCGGC ATGCTCGGCA AGGTCTACGG CGAGATCCTC
GAGAGCGGCG AGGCCCAGCC CACCGAGGCG CTGCTGCGCA ACGGCAGCGG CCGGCTGCAG
GCGTTCTTCT ACGGCCTGCT GCCGCAGAAC GCCGCCGAGC TGACCTCGTA CACCGTCTAC
CGCTGGGAGT GCGCGATCCG CTCGTCGGTG GTGCTGGGTT TTGTCGGCGC CGGCGGGCTG
GGCCAGCAGC TCGACAGCTC GATGAAGATG TTCGCCGGCG GCGAGATCGC GACCATGCTG
CTGGTGTTCA TCGCGCTGGT CGCGCTGGCC GACCGGGTCA GCAGCTGGCT GCGCCGCTCG
CTGGGCTGA
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| Protein sequence | MNAVVPRRAA PGVPSRDPAW LARLFWIGAA LVLLWPLGVA TEFRPWVLLE PDNLKLSAGF
IGSFFPPAVE PDFLLMVARE TWRTVAIATA GISLALLLAL PLTLLSTRAL SISALSGRMA
RLPFWIRQTL RGVMIVLRSV PELVWALVFV RVVGLGPTAG VLAIALTYGG MLGKVYGEIL
ESGEAQPTEA LLRNGSGRLQ AFFYGLLPQN AAELTSYTVY RWECAIRSSV VLGFVGAGGL
GQQLDSSMKM FAGGEIATML LVFIALVALA DRVSSWLRRS LG
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