| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1717 |
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| Symbol | |
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| ID | 6162811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1834071 |
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| End bp | 1835477 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664477 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790749 |
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| Protein GI | 171058400 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000202258 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCCGGC GCACGCGCAT CGGGGCGCTG TTCAACTACG ACTGGGACGC GCTCGGCCTG
GCCCGGCTGA CCGGGCAGCA CGAGTTCGAC GAAGCCGGCT TCGACCTGTT CTCGTTCCCG
AGCAACGCCC GCCTGCTCGG CTTCGACCTG CGCCGCTTTG CCGACGCCCA GGCCGCGCGC
GGGCGCCGCC GCGGCTGGGC CGGCGTGGTC TCGCAGCACG AGCAGTTCGG CGCGCTAGCG
GCCGCGCTGG TGGCCGAGAA ACTCGGCCTT CCCGGCACCG CGCCCACCGC CGTGCTGGCT
GCGCAGCACA AGCTGCATGC GCGGCGGGTG CTCGATCAGG TCTGCCCCGA GGCCAACCTG
CCGTTCGCCG CGCTCGATTG CGCCTACGGC GCCGACGTGC CGCACGACCT GTCGTACCCG
CTGTACGTCA AGCCGGTGAA GGCGGCGTTC TCGGTGCTGG CGCGCGAGGT GCGCAACCGC
GACGAACTGC AGGCCCACAC CCGCTTCGGC CGGCGCGAGC TGTGGGTGAT CCGCCGCCTG
GTCGAACCGT TCGACCGCGT CGGCCGCGAG CGCCTGCCCG AGGGCGGCAC GGCACACCGC
ATGATGCTGG AGGCGCCCGT GCAGGCGCCG CAGTTCAACC TCGACGGCTG GGTGTTCCAG
GGCCGGGCGC ACGCGCTGGG GGTGGTCGAC GCCATCATGT ACCCGCACAC CCAGGCCTTC
ATGCGCTGGG AACACCCGAG CCGGCTGGCC GCGCAGGTGC AGGCGCGTGC GCTCGAGGTG
GCGCAGAAGT TCCTGGCGGC GATCGGCTTC ACGCACGGCC TGTTCAACAT GGAGTTCTTC
TTCGACCCCG TCACCGACCG GCTGACGGTG ATCGAGTTCA ACCCGCGCCT GGCGTCGCAG
TTCGCCGACC TGTACCGGCG CGTGCGCGGC ATCGACCCGC ATGCGATGGC CATCGCGCTG
GCGCTGGGCC AGGATCCGGC CGCGCTGCCG GCCACCCGGC CCAGCGCCGG CATCGCCGCC
AGCCTGGTCT ACCGCGCCTT CACGCCCGAC GGCGTGCCGC GCATGCCCGA CGCCCGGGCC
CGCGCGGCGT TGCTGGCGGC CTTTCCCGAC GCCTTGCTGT TCGTCATGCC CAAGAGCGGC
CACTCGCTGG CGCGCGACTT CAAGTGGCTG GGCAGCCACC GCTACGGCAT CGTGCACCTC
GAAGCACGCG ACGCCGCCCA GCTGCGCCGT CGCACCCTGC GCGCCAGCGA GATCCTCGGC
TGGCCGGCGC CTTATGCCGA CCCGCCCGAT CGGCCGTCCA CCGCGCCGGC CCCGGTCGTC
GCCACGACTT CGGCCGCTGC CGCGATGCCG CCGCAGCGCG CCGGCCACCC GATCCTGCAA
GCCCCGATCA CCGGAGACTC CCCATGA
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| Protein sequence | MSRRTRIGAL FNYDWDALGL ARLTGQHEFD EAGFDLFSFP SNARLLGFDL RRFADAQAAR
GRRRGWAGVV SQHEQFGALA AALVAEKLGL PGTAPTAVLA AQHKLHARRV LDQVCPEANL
PFAALDCAYG ADVPHDLSYP LYVKPVKAAF SVLAREVRNR DELQAHTRFG RRELWVIRRL
VEPFDRVGRE RLPEGGTAHR MMLEAPVQAP QFNLDGWVFQ GRAHALGVVD AIMYPHTQAF
MRWEHPSRLA AQVQARALEV AQKFLAAIGF THGLFNMEFF FDPVTDRLTV IEFNPRLASQ
FADLYRRVRG IDPHAMAIAL ALGQDPAALP ATRPSAGIAA SLVYRAFTPD GVPRMPDARA
RAALLAAFPD ALLFVMPKSG HSLARDFKWL GSHRYGIVHL EARDAAQLRR RTLRASEILG
WPAPYADPPD RPSTAPAPVV ATTSAAAAMP PQRAGHPILQ APITGDSP
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