Gene Lcho_1716 details

Gene Information

• Locus tag: Lcho_1716
• ID: 6162810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1833439
• End bp: 1834074
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641664476
• Product: hypothetical protein
• Protein accession: YP_001790748
• Protein GI: 171058399

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.0000000302746
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACGCCA TCCGCCCGAA CCCGTCCGCC GCAGCGCGCC CGCGGCCCCG CCGCCTGATC 
GGCGCCGGCC TGCTCACCGC CGCGCTGCTG CTGGGCGGCT GCTCGGCCAT GAACGCGCAG 
AACCCGTCGT CGGCGCTCAA GCCGGTCAAC GCCGTGGCCG ATGCCGGCGC GGCCCGCCTG 
ATGCTCAAGG GCCACGACGT GGTGGCCTAC TTCACCGCCG GCCGCCACAT GGCGGGCTCG 
CCGGCCTTCC AGAGCGTGCA CGAGGGCGTG ACCTTCCGCT TCGCCAGCGC CGAGCACAAG 
GCGCTGTTCG ACCGCGAGCC GCGGAAATAC CTGCCGCAAT ACGGCGGCTA CTGCGCCAAC 
GGCATCGCCT ACGGCATCCC GTGGGGCGGC GATGCCGACA CCTGGCGCAT GGTCGACGGC 
AAGCTCTACA TCTTCGGCGG CCAGGCGTCG AAGGACGCTT TCGAACTCGA CGTGGCGGGC 
AACATCCGCC TGGCCGACAC GTATTGGCAC GACGAGGTGG CGGGCCGCCA CAGCTTCCTG 
CAGCGCGCCA GGCGGCTGGT GTTTCGCGTG CCGCACTACA AGAGCGGCGA GGCCCTGGCG 
CAGGAGGTTG CGCTGGCCCG CGCCCATCGA CCGTGA 

 

Protein sequence

MNAIRPNPSA AARPRPRRLI GAGLLTAALL LGGCSAMNAQ NPSSALKPVN AVADAGAARL 
MLKGHDVVAY FTAGRHMAGS PAFQSVHEGV TFRFASAEHK ALFDREPRKY LPQYGGYCAN 
GIAYGIPWGG DADTWRMVDG KLYIFGGQAS KDAFELDVAG NIRLADTYWH DEVAGRHSFL 
QRARRLVFRV PHYKSGEALA QEVALARAHR P