| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1703 |
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| Symbol | |
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| ID | 6162647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1819668 |
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| End bp | 1820687 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664463 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001790735 |
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| Protein GI | 171058386 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000149412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGCCG TGCTCGACGC CCAAGCCAAC GCCGCCACCG GTGCCCGCCG CACCGATGCG
CCGACGCGCG TGCGCCTGCC GCGGCGTCCG GTGCACGGCG TGCTGCTGCT CGACAAGCCG
ATCGGCTGGA CCAGCAACGA CGCGCTGCAG AAGGTCAAGA ACCTGTTGCG CGCCGAGAAG
GCCGGCCACA CCGGCACGCT CGACCCGCTG GCCACCGGCC TGCTGCCGCT GTGTTTCGGT
GCGGCGACCA AGTTCTCGCA GGTCAGCCTG GAGGCCGACA AGGCCTACCG CGCGACCGTG
CGGCTGGGCC AGCGCACCGA AGGCGGCGAC CGCGAAGGCG CGGTGATCGA GGAGCGCCCG
GTGCAGGTCG ACCGCGCCCT GATCGAGGCC GCCTGCGCGC GCCTGACCGG CAAGCTCATG
CAGATGCCGC CGATGCATTC GGCGCTCAAG CACCAGGGCA AGGCCCTCTA CGAATACGCG
CGCGCCGGCA TCACCGTCGA GCGCGCACCG CGTGAGGTGA CCCTTCACAG CATCGACATC
GTCGAATGGC AAGCTGTCAC ACCCGAACAC CTGGTGATCG ACGTGAGCTG CAGCAAGGGC
ACCTACATCC GCACGCTGGC CGAAGACCTC GGCGAGCTGC TTGGCTGTGG GGCGCACCTG
GCCGCGCTGC AGCGTACCGG CAGCGGGCCG GCCCAGCTGG CTGATGCGAT CAGCCTCGAG
GCCTTGCTCG CCTGCACCGA AGCGCAACGC GAGGCGCGGC TGCTGCCGCC CGACGTGTTG
TTGCGCCACT GGCCGGCATT GCACTTGCAA GCTGACGATG CGGGCCGCTT TTTGTCCGGC
ATGCGCCGCC GCGTTGACCA CCCCGATGCG AACGACGTGA GGGTCTACGG CCCGCACGGC
CAGACGTTCC TCGGTAGCGC CCACATCACC GCCGGCGAGC TGATCGCCGA CCGGCTCCTG
AGTCCCTTAG AAGTACAGGC GCAACTGCCC GTCGCAGCCA CGCCAACCCT CACCCCATGA
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| Protein sequence | MNAVLDAQAN AATGARRTDA PTRVRLPRRP VHGVLLLDKP IGWTSNDALQ KVKNLLRAEK
AGHTGTLDPL ATGLLPLCFG AATKFSQVSL EADKAYRATV RLGQRTEGGD REGAVIEERP
VQVDRALIEA ACARLTGKLM QMPPMHSALK HQGKALYEYA RAGITVERAP REVTLHSIDI
VEWQAVTPEH LVIDVSCSKG TYIRTLAEDL GELLGCGAHL AALQRTGSGP AQLADAISLE
ALLACTEAQR EARLLPPDVL LRHWPALHLQ ADDAGRFLSG MRRRVDHPDA NDVRVYGPHG
QTFLGSAHIT AGELIADRLL SPLEVQAQLP VAATPTLTP
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