| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1701 |
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| Symbol | infB |
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| ID | 6162768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1816206 |
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| End bp | 1819181 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664461 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001790733 |
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| Protein GI | 171058384 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00192656 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGTGA CTACCGTTGC CCAGTTCGCC ACCGAGCTCA ATCGCCCGGC GTCGACACTG
CTTGAGCAAC TTCAACACGC GGGTGTGAGC AAGGCCTCGG CAAGTGACCC GCTCACCGAT
ACGGACAAGG AAAAGCTCCT GGCCTATCTG CGTACCTCGC ATGGCACCAG CGGTGCCGAC
CGCAAGAAGA TCACGCTGAC GAAGAAATCG ACCAGCGAGA TCAAGCAGGC CGATGCGTCC
GGCAAGGCCC GCACGATCCA GGTCGAGGTG CGCAAGAAGC GCGTGTTCGT CAAGCGCGAC
GATCCGACGG GTGCCTCGTC CGAATCGCAC GATTCGCAGG ACGTGCAGGA GCTGAGTGCG
GCAGAGGAAG CCGAACTGCA GCGCCGCGAA GAAGAGGCGC TGCGCGAGGC CGAGGCCCTG
CGCCGGCAGC AGGAAGAAGA AGCCGCGCAG CGTCAGCGTG CGGCTGAAGA GCAGGCCCGC
CAGGAGCGTG AGGCGCGTGA GCGCGCCGAG CGTGAGGCGG CCGAGCGCGC AGCCGCCGAG
GCCGCGGCCC GCGTCGCCGC CGAAGCCGCC GCCGCATTGG CTGCTGCGGA GAAAGCCGCT
GCCACGGCCC CTGCGCCAGC TCCGGTTGCC GCAGTGGTTC CGAAGGCTCC GGCGCCCGCC
CCCGTGGTGG CGGCGCCGAC GCTCGCCGTG GCTTCGTTGG GTGCAAAACC GGTCGCTCCG
GCGCCGACTT CTGGGATGCG TGTGATCAAG GCAGCTGACA TCGTCGCGGG TGAGGCACAG
AAGCAGATCG ATCTGGACAA GCGCCGCAAG GCTGCCGAAG CCGAGGCCGC TGCGATCCGC
GCCATGATGG CGGCGCCCAA GAAGGTCATG GTCGCCAAGA AGCCGGAAGA GCCCAAGCCG
GTGGTTCCCG CTGCGGGCGC TGTCGGCAAG GACGGCATCA AGGGCACGAT CCATCGTCCG
AAGACCGCTG CCGGTGCGCC TGCACCGGGT GCCGCGCCGG GCGCGGCAGC CAAGCCGGGC
GAGAAGAAAT CGGTCAAGTC GGAAAAGCTC TCCTCGAGCT GGGCCGACGA CGCCAAGAAG
CGTGGCGCGG CCGCGCCTGC CAGCAAGGGC CGTGCACCCG ACGTGCGTGG CGGCTGGAAG
GCGCCGGGCG GCGCGCGTGG TGGCCGTCGT GGCGATCGCG GTGGTGCGGT CTCGAACTTC
ACGCCGCCGG CCGACGTGCA GATCCACGAG GTCCACGTGC CCGAAACCAT CTCGGTGGCC
GATCTGGCGC ACAAGATGTC GGTCAAGGGC TCCGAGGTCA TCAAGCAGCT GATGCGGTTG
GGCCAGATGG TCACGATCAA CCAGCAGCTC GACCAGGAGA CCGCGATGAT CGTGGTCGAG
GAAATGGGCC ACAAGGCGTT TGCCGCCAAG CTCGACGATC CGGACGCGTT CCTCGAAGAA
GAGAACCTGG CCGAAGCCGG CGAATCGCTG CCGCGCCCGC CGGTGGTCAC GGTCATGGGT
CACGTCGACC ACGGCAAGAC CTCGCTGCTG GACTACATCC GCACCTCCCG CGTGGCAGCG
GGCGAAGCCG GCGGCATCAC GCAGCACATC GGCGCCTATC ACGTCGAGAC GCCGCGTGGC
GTGATCACCT TCCTCGACAC CCCGGGCCAC GAAGCCTTCA CGGCCATGCG TGCCCGCGGT
GCCAAGGCGA CCGACATCGT CATCCTGGTG GTGGCTGCCG ACGACGGCGT GATGCCCCAG
ACCAAGGAAG CGATCGCCCA CTCGAAGGCG GCCGGCGTGC CGATCGTGGT GGCGATCAAC
AAGATCGACA AGCCCGACTC CAACCTCGAC CGTGTTCGCA GCGAACTGGT GGCCGAAGGG
GTGGTGCCTG AAGAGTTCGG CGGCGATGCA CCGTTCTGCC TGGTGTCGGC CAAGACCGGC
CAGGGCATCG ACACGCTGCT CGAGCAGGTG CTGCTGCAGG CCGAGGTGCT CGAACTGAAC
GCCCCGCAGG AAGCGCTGGC CAAGGGCCTG GTGATCGAAG CCCGTCTCGA CAAGGGCCGC
GGCCCGGTCG CCACGGTGCT GGTGCAGTCG GGCACGCTCA AGCGTGGCGA CGTGGTGCTG
GCCGGCCAGA GCTACGGCCG CGTGCGCGCC ATGCTCGACG AGACCGGCAA GGCCGCGCAG
GAAGCCGGCC CGTCGATCCC GGTCGAGATC CAGGGTCTGA CCGAGGTCCC GTCGGCCGGC
GACGAGTTCA TGGTGCTAGC CGACGAACGT CGTGCCCGTG AGATCGCCAC CTTCCGCCAG
GGCAAGTACC GCGAGGTCAA CCTCAACCGC CGCCAGGCCG CCAAGCTCGA GAACATGTTC
GAGAACATGG GCCAGGGCGC CGCACAGACG CTGGCACTGA TCATCAAGGC CGACGTGCAG
GGTTCGCAGG AGGCACTGGC TGCTTCGCTG CTCAAGCTGT CGACCGACGA GGTCAAGGTT
CAGATCGTGC ATGCCGCGGT GGGCGGCATC AGCGAGTCCG ACGTCAACCT GGCGCTGGCT
TCGAAGGCGG TCATCATCGG CTTCAACGTG CGCGCCGATG CCGGTGCGCG CAAGCTGGCC
GATGGCAACG ACGTCGACCT GCGCTACTAC AACGTCATCT ACGACGCGGT CGACGAGATC
AAGTCGGCGA TGTCGGGCAT GCTGGCGCCC GAGCAGCGCG AAGAGGCGAT CGGCACCGCC
GAGATCCGCA CGGTGTTCGT GGCAACCAAG ATCGGCACCA TTGCCGGCTC GATGGTCACC
TCGGGCCTGG TGCGCCGCAA CTGCCGCTTC CGCCTGCTGC GCAACAACAT CGTCATCTAC
ACCGGCGAAG TCGATTCGGT GCGCCGCCTG AAAGACGACG TCAAGGAAGT CAAGGAAGGC
TTCGAGTGCG GTATCAAGCT CAAGAACTAC ACCGACATCG CTGAAGGCGA TCAGCTGGAG
TTCTTCGAGA TCAAGGAAGT GGCACGAACG CTGTAA
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| Protein sequence | MAVTTVAQFA TELNRPASTL LEQLQHAGVS KASASDPLTD TDKEKLLAYL RTSHGTSGAD
RKKITLTKKS TSEIKQADAS GKARTIQVEV RKKRVFVKRD DPTGASSESH DSQDVQELSA
AEEAELQRRE EEALREAEAL RRQQEEEAAQ RQRAAEEQAR QEREARERAE REAAERAAAE
AAARVAAEAA AALAAAEKAA ATAPAPAPVA AVVPKAPAPA PVVAAPTLAV ASLGAKPVAP
APTSGMRVIK AADIVAGEAQ KQIDLDKRRK AAEAEAAAIR AMMAAPKKVM VAKKPEEPKP
VVPAAGAVGK DGIKGTIHRP KTAAGAPAPG AAPGAAAKPG EKKSVKSEKL SSSWADDAKK
RGAAAPASKG RAPDVRGGWK APGGARGGRR GDRGGAVSNF TPPADVQIHE VHVPETISVA
DLAHKMSVKG SEVIKQLMRL GQMVTINQQL DQETAMIVVE EMGHKAFAAK LDDPDAFLEE
ENLAEAGESL PRPPVVTVMG HVDHGKTSLL DYIRTSRVAA GEAGGITQHI GAYHVETPRG
VITFLDTPGH EAFTAMRARG AKATDIVILV VAADDGVMPQ TKEAIAHSKA AGVPIVVAIN
KIDKPDSNLD RVRSELVAEG VVPEEFGGDA PFCLVSAKTG QGIDTLLEQV LLQAEVLELN
APQEALAKGL VIEARLDKGR GPVATVLVQS GTLKRGDVVL AGQSYGRVRA MLDETGKAAQ
EAGPSIPVEI QGLTEVPSAG DEFMVLADER RAREIATFRQ GKYREVNLNR RQAAKLENMF
ENMGQGAAQT LALIIKADVQ GSQEALAASL LKLSTDEVKV QIVHAAVGGI SESDVNLALA
SKAVIIGFNV RADAGARKLA DGNDVDLRYY NVIYDAVDEI KSAMSGMLAP EQREEAIGTA
EIRTVFVATK IGTIAGSMVT SGLVRRNCRF RLLRNNIVIY TGEVDSVRRL KDDVKEVKEG
FECGIKLKNY TDIAEGDQLE FFEIKEVART L
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