| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1695 |
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| Symbol | |
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| ID | 6163203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1809315 |
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| End bp | 1810577 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664455 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001790727 |
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| Protein GI | 171058378 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.157617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TGGAAATGAC CTTGGCCCGC ACCCTGCTGG CCACCGCCGC TGTGATCACC
CTCAACGGCG TGGCGCAAGC CGGCGAAGTC GAGGTGCTGC ACTACTGGAC GTCGGGCGGC
GAGGCCAAGT CGGCCGCTGC GCTCAAGGCC CAGCTCGAGA AGCAGGGTCA CAGCTGGAAG
GACTTCGCGG TCGCCGGCGG CGGTGGCGAA TCGGCCATGA CGGTGCTGAA GTCGCGCGTG
GTCTCGGGCA ACGCCCCGGC CGCGGCCCAG ATCAAGGGCC CGTCGATCCA GGAATGGGCG
CGTGAAGGCG TGCTGACCAA CCTCGACGAA ACCGCCAAGA CCGAGAAGTG GGACACCCTG
CTGCCGCCGG TGGTCGCCGA CGTCATGAAG TACAAGGGCA AGTACGTCGC CGTGCCGGTC
AACGTGCACC GCGTCAACTG GCTGTGGGCC AACCCCGAAG CCCTGAAGAA GGCCGGCGCC
AAGCTGCCGA CCAACTGGGA CGAGTTCTTC GTCGCCGCCG ACAAGCTGAA GGCCGCCGGC
ATCATCCCCG TGGCCCACGG CGGCCAGTCG TGGCAGGACT TCACCACCTT CGAGAGCGTG
GCGCTGGGCG TCGGTGGCGC CGACTTCTAC AAGAAGGCCC TGGTGCAGCT CGATCAGGCC
AGCCTGACCA GCGCGACGAT GGAAAAGGTC ATGACCACCT TCAAGAAGGT CAAGACCTAC
ACCGACAAGA ACGCCCCGGG CCGTGACTGG AACCTGGCGA CCGCGATGGT CATCAAGGGC
GAAGCCGGCA TGCAGCTGAT GGGCGACTGG GCCAAGGGCG AGTTCGTCGC CGCCGGCAAG
GTGCCGGGCA AGGACTTCCT GTGCGCCGCC GCCCCCGGCA CCGCCAAGTC GTTCACCTTC
AACGTCGACT CGTTCGCGAT GTTCCAGGTC AAGGGCGACG ACAAGGTCAA GGCCCAGAAG
GACCTGGCTG CCGCCATCCT GTCGCCCGAG TTCCAGGAGG TGTTCAACCT CAACAAGGGC
TCGATCCCGG TGCGCCTGAA CATGCCGATG ACCAAGTTCG ACGACTGCGC CAAGCTGTCG
AGCAACGACT TCGTCGCCAC CAACAAGGGC GGCTCGCTGG TGCCGTCGAT CGCCCACGGC
ATGGCCGTCT CGTCGGCCGC GCAAGGCGCG ATCCAGGACG TCGTCAGCCA GTTCTGGAAC
GACGACAAGA TGAGCGCCAA GGACGCGGTC ACCAAGATCG CCACCGCCGC CAAGACCAAG
TAA
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| Protein sequence | MNKMEMTLAR TLLATAAVIT LNGVAQAGEV EVLHYWTSGG EAKSAAALKA QLEKQGHSWK
DFAVAGGGGE SAMTVLKSRV VSGNAPAAAQ IKGPSIQEWA REGVLTNLDE TAKTEKWDTL
LPPVVADVMK YKGKYVAVPV NVHRVNWLWA NPEALKKAGA KLPTNWDEFF VAADKLKAAG
IIPVAHGGQS WQDFTTFESV ALGVGGADFY KKALVQLDQA SLTSATMEKV MTTFKKVKTY
TDKNAPGRDW NLATAMVIKG EAGMQLMGDW AKGEFVAAGK VPGKDFLCAA APGTAKSFTF
NVDSFAMFQV KGDDKVKAQK DLAAAILSPE FQEVFNLNKG SIPVRLNMPM TKFDDCAKLS
SNDFVATNKG GSLVPSIAHG MAVSSAAQGA IQDVVSQFWN DDKMSAKDAV TKIATAAKTK
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