| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1694 |
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| Symbol | |
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| ID | 6163202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1808250 |
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| End bp | 1809137 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664454 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001790726 |
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| Protein GI | 171058377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.184749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGAT CGACCGCCAG CGTGCGGCTG GACCGCTGGT TGCCACGCAT CGTGCTGGCA
CCCAGTTTCG TCCTGTCCTT CCTGTTCATC TACGGCCTGA TCGCCTGGAA CGGCTACCTC
TCGGTGTCGG CCTCGCGGCT GCTGCCGAAC TACGAATTTG TCGGCCTGGA GCAGTACGCC
ATCCTCTGGG AGAGCGAGCG CTGGATGGTC GCGCTCAAGA ACCTGGGCAT CTTCTCGGTG
CTGTTCATCG GCTTCGCGAT GGTCGTCGGC CTGTTCCTGG CGGTGCTGCT GGACCAGAAG
ATCCGCGCCG AAGGCGTGCT GCGCACGATC TACCTGTACC CGATGGCGCT GTCGTTCATC
GTCACCGGCA CGTCGTGGAA ATGGATCATG AACCCGGGCC TGGGCATCGA GCACCTGATG
CACCAGTGGG GCTTCGAGAA CTTCAGCTTC GACTGGCTGG TCGACCCGGA GATGGCGATC
TACACCGTCG TGATCGCGGG GGTCTGGCAG AGCGCCGGCT TCGTGATGGC GCTGTTCCTG
GCCGGGCTGC GCGGCATCGA CGAGTCGATC ATCAAGGCGG CCCAGATCGA CGGCGCCAGC
CTGCCGCGCA TCTACCTGCG CATCATCATC CCGAGCCTGC GGCCGGTGTT CTTCAGCACG
CTGATGGTGC TGGCGCACAT CGCCATCAAG AGCTTCGACC TGGTGATGGC GCTGACCGCC
GGCGGCCCCG GTTTTGCCAC CGACGTGCCG GCCACCTACA TGTACACGAT GGCCTTCAAC
CGCGGCCAGA TCGGCCTGGG CGCCGCGTCG GCCACGATCA TGCTGGCGAC GGTGGCGGCG
ATCGTCGTGC CCTATCTCTA CAGCGAGCTG CGCTCGTCAC GCAAGTAA
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| Protein sequence | MSRSTASVRL DRWLPRIVLA PSFVLSFLFI YGLIAWNGYL SVSASRLLPN YEFVGLEQYA
ILWESERWMV ALKNLGIFSV LFIGFAMVVG LFLAVLLDQK IRAEGVLRTI YLYPMALSFI
VTGTSWKWIM NPGLGIEHLM HQWGFENFSF DWLVDPEMAI YTVVIAGVWQ SAGFVMALFL
AGLRGIDESI IKAAQIDGAS LPRIYLRIII PSLRPVFFST LMVLAHIAIK SFDLVMALTA
GGPGFATDVP ATYMYTMAFN RGQIGLGAAS ATIMLATVAA IVVPYLYSEL RSSRK
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