Gene Lcho_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1684 
Symbol 
ID6162479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1796523 
End bp1797395 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID641664439 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_001790716 
Protein GI171058367 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGC TCGACAAGCT GCTGCCGCCC AAGATCCAGC ACACCAATCC GACCGACCGC 
CGCACGGTGC CGGAAGGGCT GTGGGTCAAA TGCCCGTCCT GCGAGACGGT GCTCTACAAG 
ACCGACCTAG AGCAGAACGT CAACGTCTGC CCCAAGTGCA CGCACCATCA CCGCATCGAC 
GCGCGTGCGC GACTCGATTC CTTCCTGGAT CAGGAAGGGC GCTACGAGAT CGGCCAGGAA 
GTGGTGCCGG TCGACGCGCT CAAGTTCAAG GACAGCAAGA AGTACTCCGA GCGCATCAAG 
GAGGCCATGG AAGCCACCGG CGAGACCGAT GCGCTGGTCG TGATGGGCGG CTCGGTGATG 
AGCATCCCGC TGGTCGTGGC CGCCTTCGAG TTCGAGTTCA TGGGCGGCTC GATGGGCTCG 
GTGGTCGGCG AGCGCTTCGT GCGCGGCGTC GAGGCGGCGA TCGAGCAGAA GGTGCCGTTC 
GTCTGCTTCA CCGCCACCGG TGGCGCACGC ATGCAGGAGG GCCTGCTGTC GCTGATGCAG 
ATGGCCAAGA CCAACGCCTC GCTGACCCGC CTGGCCAAAG CCAAGCTGCC CTACATCAGC 
GTGCTGACCG ATCCGACGAT GGGTGGCGTG TCGGCCGGTT TTGCCTTCGT GGGTGATGTG 
GTGATCGCCG AGCCCAAGGC GCTGATCGGC TTTGCCGGCC CGCGCGTGAT CGAGAACACC 
GTGCGCGAGA AGCTGCCCGA AGGCTTCCAG CGTTCGGAGT TCCTGCTCGA GAAGGGCGCG 
CTCGACATGA TCGTCGACCG CCGTCAGCTG CGTTCGACCA TCGCCCGCAC GCTGGCCATG 
CTGCAGCGCC AGAGCGCCGA CGCCGTCGCC TGA
 
Protein sequence
MSWLDKLLPP KIQHTNPTDR RTVPEGLWVK CPSCETVLYK TDLEQNVNVC PKCTHHHRID 
ARARLDSFLD QEGRYEIGQE VVPVDALKFK DSKKYSERIK EAMEATGETD ALVVMGGSVM 
SIPLVVAAFE FEFMGGSMGS VVGERFVRGV EAAIEQKVPF VCFTATGGAR MQEGLLSLMQ 
MAKTNASLTR LAKAKLPYIS VLTDPTMGGV SAGFAFVGDV VIAEPKALIG FAGPRVIENT 
VREKLPEGFQ RSEFLLEKGA LDMIVDRRQL RSTIARTLAM LQRQSADAVA