Gene Lcho_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1681 
Symbol 
ID6163948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1793748 
End bp1794410 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID641664436 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001790713 
Protein GI171058364 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTTT CGCCTGCCCG AACACGCATC AAGATCTGCG GCCTGACGCG GCCCGGTGAC 
GTGGATGTGG CCGTGGCTGC CGGCGCCGAT GCGATCGGTC TGGTCTTCTA TCCACGCAGC 
CCGCGCCATG TCAGCCTGGC CCTGGCGAGC GATCTGGCTC GGCGCCTGCC ACCCTTCGTG 
ACCCCGGTCG GATTGTTCGT GAATGCGTCG CCGGAAGACG TCGAACGGGC CTGCGAGCAG 
ATCCCGAACC TGCTGCTGCA GTTTCACGGT GACGAAACAC CGGCGCAGTG CGAGGCCTCG 
GGCCGACCGT ATCTGCGTGC TGCGCGCATG GATCCGGGTT TCGACTTGTT AAACTTCGCA 
CGCTCCTACA CCAGCGCCCA GGCCATCCTG CTCGACGCCC ATGTCGAGGG TTATGGCGGC 
GGCGGAAAGG TCTTCGATTG GTCGCTCATT CCCTCAGACG TGCCCCGTCC GGTCGTTTTG 
TCTGGTGGGT TGAATCCTGC AAACGTGACC GATGGAGTGC TTCGCGTCCG GCCGTGGGCC 
GTTGATGTGA GTTCTGGCGT CGAGTCGGCC AAGGGCATCA AGGATGCCGT GCTGATGCGC 
CAGTTTTGCG AAGCCGTCCG TGATGCTGAT GCGCGTTCGA TCGACGCCAG CAGCGGATAT 
TGA
 
Protein sequence
MILSPARTRI KICGLTRPGD VDVAVAAGAD AIGLVFYPRS PRHVSLALAS DLARRLPPFV 
TPVGLFVNAS PEDVERACEQ IPNLLLQFHG DETPAQCEAS GRPYLRAARM DPGFDLLNFA 
RSYTSAQAIL LDAHVEGYGG GGKVFDWSLI PSDVPRPVVL SGGLNPANVT DGVLRVRPWA 
VDVSSGVESA KGIKDAVLMR QFCEAVRDAD ARSIDASSGY