| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1680 |
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| Symbol | truA |
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| ID | 6163947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1792948 |
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| End bp | 1793736 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664435 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001790712 |
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| Protein GI | 171058363 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTCTGG CGCTGGGCCT GAGCTACCGC GGATCGGCCT ACAGGGGCTG GCAGAGCCAG
ACCAACGGGG CGACCGTCCA GGATGTGCTC GAAGCGGCCT TGTGCCGCTT TGCCGCCACG
CCGATCCGCG TCAGCTGCGC CGGGCGCACC GATGCGGGGG TTCACGCGCT CAATCAGGTC
GTCCACCTCG ATACCGATCG CGACCGCGAG CCCTTTTCGT GGGTCCGTGG CACCAACACC
TACCTGCCGC CGGACGTGGC GGTCCAGTGG TGTCGGCCTG TGCCCGATGC CTTCCATGCC
CGCAATGCGG CGCGAGCCCG GCGCTATGCC TATGTGCTGC TCGAGTCGCC GGTGCGTCCG
GCGATGGAGG CCGGGCAGGT CGGCTGGATC TTCCGCCCGC TGGATCAGGC GCGCATGGAG
GCCTCTGCGG CCTTGCTGAT CGGCGAGCAC GACTTCTCGG CTTTCCGGTC GGCCGATTGC
CAGGCGCTGT CGCCGGTCAA GCAGATGCGC ACCATCCGGA TCGGCCGGCA TGGCCCGTAC
TGGCGCTTCG ATTTCGAGGC TTCCGCGTTC CTGCACCACA TGATCCGCAA CCTGATGGGG
TGCCTGATCG CGGTCGGCAC CGGTGCACGC GATCCGGCCT GGCTCGCCGG GGTTCTGGCG
TCGCGTGACC GCCGGCTGGC GGCGCCGACC TTTTCTCCCG ACGGGCTGTA TTTTCTGGGC
CCGCGCTACG ATGCCGAGCT TGTTCTGCCC GAGCACACAC CCGCTTTCGA CTGGCTGCCG
GGGGCCTGA
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| Protein sequence | MRLALGLSYR GSAYRGWQSQ TNGATVQDVL EAALCRFAAT PIRVSCAGRT DAGVHALNQV
VHLDTDRDRE PFSWVRGTNT YLPPDVAVQW CRPVPDAFHA RNAARARRYA YVLLESPVRP
AMEAGQVGWI FRPLDQARME ASAALLIGEH DFSAFRSADC QALSPVKQMR TIRIGRHGPY
WRFDFEASAF LHHMIRNLMG CLIAVGTGAR DPAWLAGVLA SRDRRLAAPT FSPDGLYFLG
PRYDAELVLP EHTPAFDWLP GA
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