| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1675 |
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| Symbol | |
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| ID | 6164091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1785560 |
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| End bp | 1786984 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664430 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001790707 |
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| Protein GI | 171058358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAC GCACCCTGTA CGACAAGCTC TGGGACGAAC ACGTCGTCCA CACCGAAGAG
GACGGCACCG CCGTGCTCTA CATCGATCGC CATCTGGTGC ACGAAGTGAC CAGCCCGCAG
GCCTTCGAAG GTCTGCGTCT GGCCGGGCGC AAGGTCTGGC GTGTCAGTTC GATCGTCGCC
ACCGCCGATC ACAACACGCC CACCACCGGC TGGGAGCAGG GCTACGACGG CATCGCCGAT
CCGATCAGCA AGCTGCAGAT CACCACGCTC GACAGCAACA TCGCGGCGGT CGGCGCGGCG
GCCTACTTTC CGTTCATGGA CAAGCGCCAG GGCATCGTGC ACGTCATCGG CCCGGAGCAG
GGCGCCACGC TGCCGGGCAT GACGGTCGTC TGCGGCGACA GCCACACCAG CACGCACGGC
GCGTTCGGTG CGCTGGCGCA CGGCATCGGC ACCAGCGAGG TCGAGCACGT GATGGCCACC
CAGACGTTGC TGGCCAAGAA GGCCAGGAAC ATGCTGGTCA AGGTGGAGGG TGTCGTGCCC
AAGGGTTGCG GCGCCAAGGA CATCGCGCTG GCCATCATCG GCCGCATCGG CACCGCGGGC
GGCACCGGCT ACACGATCGA GTTCGGCGGC AGCGCGATTC GCGCGCTGAG CATGGAAGGC
CGCATGACGG TCTGCAACAT GGCGATCGAG GGCGGCGCGC GCGCCGGCAT GGTCGCGGTC
GACGAGACCA CGATCAACTA CGTCAAGGGC CGGCCGTTCG CGCCCAAGGG CGTCGAGTTC
GACCAGGCCG CGATCCACTG GCGCACGCTG CGCTCGGATG CCGACGCGAA GTTCGACGCG
GTGGTCGAGA TCGACGCCGC GCAGATCCGC CCCCAGGTGA CCTGGGGCAC GTCGCCCGAG
ATGGTGCTGT CGATCGAGGA CCGCGTGCCC GATCCCGACA AGGAAAAGGA CGATGTCAAG
CGCGGCTCGA TCGAGCGCGC GCTGGCCTAC ATGGGCCTGG AGCCGAACAA GGCGATCTCC
GATGTGCGCA TCGACAAGGT CTTCATCGGC TCGTGCACCA ACAGCCGCAT CGAGGACATG
CGCGAAGCCG CTGCCGTGGT GCGCCGCATC GGCGGGCGCG TGGCGAGCAA TGTCAAGCTG
GCGCTGGTGG TGCCGGGCTC GGGCCTGGTG AAGGCGCAGG CCGAGGCCGA GGGGCTGCAC
GAGGTGTTCA AGGCGGCCGG TTTCGAGTGG CGCGAGCCGG GCTGCTCGAT GTGCCTGGCG
ATGAACGCCG ACCGCCTGGA GCCGGGCGAG CGCTGCGCTT CCACCAGCAA CCGCAACTTC
GAGGGTCGCC AGGGTGCCGG TGGCCGAACC CACCTGGTCA GCCCGGCGAT GGCTGCGGCT
GCGGCCATGA ACGGCCACTT CGTCGACGTG CGTCGCATCG CGTAA
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| Protein sequence | MTGRTLYDKL WDEHVVHTEE DGTAVLYIDR HLVHEVTSPQ AFEGLRLAGR KVWRVSSIVA
TADHNTPTTG WEQGYDGIAD PISKLQITTL DSNIAAVGAA AYFPFMDKRQ GIVHVIGPEQ
GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVMAT QTLLAKKARN MLVKVEGVVP
KGCGAKDIAL AIIGRIGTAG GTGYTIEFGG SAIRALSMEG RMTVCNMAIE GGARAGMVAV
DETTINYVKG RPFAPKGVEF DQAAIHWRTL RSDADAKFDA VVEIDAAQIR PQVTWGTSPE
MVLSIEDRVP DPDKEKDDVK RGSIERALAY MGLEPNKAIS DVRIDKVFIG SCTNSRIEDM
REAAAVVRRI GGRVASNVKL ALVVPGSGLV KAQAEAEGLH EVFKAAGFEW REPGCSMCLA
MNADRLEPGE RCASTSNRNF EGRQGAGGRT HLVSPAMAAA AAMNGHFVDV RRIA
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