Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1673 |
Symbol | |
ID | 6164088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1782563 |
End bp | 1783936 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664427 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001790705 |
Protein GI | 171058356 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACG TCATCGCTGC GCTCCTCGGC GGCAAGACGC GCATCGCGGT GGCGTACAGC GGCGGGCGTG ATTCCAGCGC GCTTCTGCAT GCCACCGTCG CGTGTGCTGC GGCCAGGGTC GACGTTCATG CCCTCCATGT GCAGCATGGC CTGAGCGCGT TCGCGCCCGA CTGGCTGGCT CACTGCGAAC GCCGATGTCG GGCGTTGTCG TTGCAAGGCG CGCGGTTGTG GCTGCACACG CGTTCGCTGG CCTTGCAGCC CGCGCGTGGC GAGAGCATCG AAGCACTCGC CCGGCGCGAG CGCTATCGTG CGCTCGCGTC GATGGCTCGC GAGGCGGGCT GCGACACCGT GCTGCTGGCG CATCACCGTG ACGATCAGGT CGAGACCTTC CTGCTGCAGG CGCTGCGTGG TGCCGGCGCG GCAGGCCTGT CGGCGATGCC TTCGATCGCT TGGCGCGAGG GCCTGACCTG GGCGCGGCCG TGGCTGGATC GGCCGCGGTC CGCGATCCAG TCGTATGTCG ATGCGCATGC GCTCGAGTTC GTCGAGGATG ACAGCAATGC CAGCCCGCGG CATGCCCGCA ACCGGCTGCG TCTGACGGTG ATGCCGGCCC TGCGCCAGGC CTTCGGCGAC GCCGATGTCG CGCTGACGGC GGCGGTTCAG CACGCTCAGG ATGCTCAAGC CTGCATGCAG GCACTCGCCG AGGCCGATCT GCAGGCCGTG AGTCGTGCCG ATGGTCTCGC CATCGATCCG ATGCTGGCGT TGGGGGCGCC TCGAGTCCGC AATCTCCTGC GCCACTGGCT GCGGCAGTCG GCCGGGCAGC CGCCGGCTGC GACGCTCCTG CGGCGGCTTG CCGACGAACT GCCGCACGCG CCGGACGGCG CGTGGCGGCA TGCGGCGGGT GTCGTGGCCG CCTATCGGGG GCGGCTCAGC TGGCGCCGGG ATGTCCTGCC CCCGATCGTG GCCGATCCGG ATGCGAAGGG CTCGGGCACC TTGCCGCGAT CGCCTGTCCC GATGGCGCTC GTGCCGGGCC CCAATGCGGT GCCGTCGTGG CGCGGCACGC TCTGGGTCGA CGTCGTCGAG CGCGATGGCG CGGCCCTGGA GACGCTGGCG GGAGTGACCT TGCGCGAGCG CTGCGGTGGC GAGCGTTTCC AGTCGCATCC GGCGGGCGTG CCGCGGTCCT TGAAGAAGCA GTTCCAGGCC GCGGCACGGC CGAGTTGGGC GCGCCGCGGG CCGCTGGTCT ACGTCGGTGA ACAGCTGATC TACGTGCCGG GCCTGGGACT TGATGCGCGC TGCGTGGCGG CGATCGGCGT CACGCAGGCG CGTCTGCGCT GGCAGGCTGC TGACGCCGTC GAGGATGCGC CACCCGCTGC ATGA
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Protein sequence | MLDVIAALLG GKTRIAVAYS GGRDSSALLH ATVACAAARV DVHALHVQHG LSAFAPDWLA HCERRCRALS LQGARLWLHT RSLALQPARG ESIEALARRE RYRALASMAR EAGCDTVLLA HHRDDQVETF LLQALRGAGA AGLSAMPSIA WREGLTWARP WLDRPRSAIQ SYVDAHALEF VEDDSNASPR HARNRLRLTV MPALRQAFGD ADVALTAAVQ HAQDAQACMQ ALAEADLQAV SRADGLAIDP MLALGAPRVR NLLRHWLRQS AGQPPAATLL RRLADELPHA PDGAWRHAAG VVAAYRGRLS WRRDVLPPIV ADPDAKGSGT LPRSPVPMAL VPGPNAVPSW RGTLWVDVVE RDGAALETLA GVTLRERCGG ERFQSHPAGV PRSLKKQFQA AARPSWARRG PLVYVGEQLI YVPGLGLDAR CVAAIGVTQA RLRWQAADAV EDAPPAA
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