| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1665 |
|---|
| Symbol | |
|---|
| ID | 6162138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1774570 |
|---|
| End bp | 1775358 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641664419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001790697 |
|---|
| Protein GI | 171058348 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.754327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCC GCTGGTGGCG CAAGCAGCGC GATGCGCGAG CCCTTCGCCA GCGCGCGATT
CCCGACGAGC TGTGGCTCGA CACCTTGCGC CGGCATCCGT TCCTGACGCT GCGCCCGCTC
GACGACCTGC TGAAATTGCG CAGCCTGTGC GCGCTGTTCC TCGATCGCAA GGAATTCACC
GGCGCGGACG GCCTCGAAGT CACCGACGAG ATGGCGGTCG CCGTGGCCGC ACAGGCCTGC
CTGCCGGTGC TGCACCTCGA TCTGGCCGCC TACGACGGCT TCGTCGGCAT CGTGATGCAC
CCCGGTGAAG TGGTCGCCCA GCGCGAATGG ATCGACGAAG ACGGCATCTG CCATCAAGGC
GAGGAGGAAC TCGCCGGCGA GGCGATGCCC GGCGGGCCGG TGATGCTGGC CTGGAGCGAG
GTCGATGCCG GCGGTGAACT CGCCGCCAGC GGCTACAACG TCGTGATCCA CGAGTTCGTG
CACGTGCTCG ACATGCTCGA CGGCGAGGCC GACGGCGTGC CGCCCCTGCC CGCACGTGCC
GACCGGGCGC AATGGCTGGC GGTCATCGAA CCGGCTTTCG AGCGCCTGCG CCAGCAGGTC
GAGGCCGACG AAGACACCAT GCTCGACCCC TACGGGGCAA GCGCCATCGA AGAGTTCTTT
TCGGTCGCCA GCGAAGCGTT TTTCGTCGCA CCCGACCTGC TGATCGCGAC CGAGCCAGCG
GTCTATCGGC TGCTGCGGGA CTACTTCCGC CAGGATCCCG CGCGATACGC CGGAATCCGT
CCCCGCTGA
|
|---|
| Protein sequence | MLSRWWRKQR DARALRQRAI PDELWLDTLR RHPFLTLRPL DDLLKLRSLC ALFLDRKEFT
GADGLEVTDE MAVAVAAQAC LPVLHLDLAA YDGFVGIVMH PGEVVAQREW IDEDGICHQG
EEELAGEAMP GGPVMLAWSE VDAGGELAAS GYNVVIHEFV HVLDMLDGEA DGVPPLPARA
DRAQWLAVIE PAFERLRQQV EADEDTMLDP YGASAIEEFF SVASEAFFVA PDLLIATEPA
VYRLLRDYFR QDPARYAGIR PR
|
|---|
| |