Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1663 |
Symbol | |
ID | 6162136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1771850 |
End bp | 1772197 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641664417 |
Product | ATP-dependent Clp protease adaptor protein ClpS |
Protein accession | YP_001790695 |
Protein GI | 171058346 |
COG category | [S] Function unknown |
COG ID | [COG2127] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.682393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC AGAAGCCCAA TACCCCGAAC GTCCCGGCAC CGCCGGACGA TGGTCAGGGT GCTGTCATCG CCGAGAAGCA GTTGCAGCGC GTGGAACCCC CCCGGGTTTA TCAAGTTGTG ATGCTGAACG ACGATTTCAC GCCTATGGAG TTTGTCGTGA TGGTTCTGCA GCAGTTCTTC CGTCACGACC TCGAGGCCGC GACGCAGATC ATGCTGAAGA TTCATCATGA GGGCCGAGCG GTTTGCGGCG TCTATACGCA AGATGTCGCC GCAACCAAAG TTGAGATGGT TCAGGCAGCC GCACGCCGGG CGGGTCATCC GCTGCAGTGC ACCATGGAGG TCGCATGA
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Protein sequence | MSDQKPNTPN VPAPPDDGQG AVIAEKQLQR VEPPRVYQVV MLNDDFTPME FVVMVLQQFF RHDLEAATQI MLKIHHEGRA VCGVYTQDVA ATKVEMVQAA ARRAGHPLQC TMEVA
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