Gene Lcho_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1663 
Symbol 
ID6162136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1771850 
End bp1772197 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content59% 
IMG OID641664417 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_001790695 
Protein GI171058346 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.682393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC AGAAGCCCAA TACCCCGAAC GTCCCGGCAC CGCCGGACGA TGGTCAGGGT 
GCTGTCATCG CCGAGAAGCA GTTGCAGCGC GTGGAACCCC CCCGGGTTTA TCAAGTTGTG
ATGCTGAACG ACGATTTCAC GCCTATGGAG TTTGTCGTGA TGGTTCTGCA GCAGTTCTTC
CGTCACGACC TCGAGGCCGC GACGCAGATC ATGCTGAAGA TTCATCATGA GGGCCGAGCG
GTTTGCGGCG TCTATACGCA AGATGTCGCC GCAACCAAAG TTGAGATGGT TCAGGCAGCC
GCACGCCGGG CGGGTCATCC GCTGCAGTGC ACCATGGAGG TCGCATGA
 
Protein sequence
MSDQKPNTPN VPAPPDDGQG AVIAEKQLQR VEPPRVYQVV MLNDDFTPME FVVMVLQQFF 
RHDLEAATQI MLKIHHEGRA VCGVYTQDVA ATKVEMVQAA ARRAGHPLQC TMEVA