Gene Lcho_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1657 
Symbol 
ID6161553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1767910 
End bp1768704 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID641664411 
Productphosphate ABC transporter, ATPase subunit 
Protein accessionYP_001790689 
Protein GI171058340 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.943985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA CCATCACCCT GCCCGAGAAC GCGCCGACCC TGAAGGCGGA GTCGAAGAAC 
CTCAACTTCT TCTACGGCGA CTTCAAGGCG CTCAAGGGCA TCTCGATGCC CATCTACGAG
AACAAGGTCA CCGCGCTGAT CGGCCCCAGC GGCTGCGGCA AGTCGACCTA TCTGCGCTGC
TTCAACCGCA TGCACGACCT CTATTCGGGC ACGCGCTACG ACGGCAGCAT CGTGCTGCAC
CCCGACGAGG TCGACGTGCT GCACAAGAGC GTCGACCCGA TCGAGGTGCG CATGCGCATC
TCGATGGTGT TCCAGAAGCC CAACCCGTTC CCGAAGTCGA TCTACGAGAA CGTCGCCTAC
GGCCTGCGCG TGCGTGGCGA GAAGTCGCGC TCCTACATCG ACGACAAGGT CGAGGCGGCG
CTCAAGGGCG GGGCCCTGTG GGGCGAGGTG AAGGACCGCC TGAACGAGGT GGCGGTCAAC
CTGTCGGGCG GCCAGCAGCA GCGCCTGTGC ATCGCCCGCG CACTGGCGAC CGACCCCGAG
ATCATCCTGT TCGACGAGCC GACCTCGGCG CTCGACCCGA TGGCCACCGG CAGCATCGAG
GAGCTGATCG GCGAGATCAA GAACAAGGTG ACGATCCTGA TCGTCACGCA CAACATGCAG
CAGGCGGCAC GCGTGTCCGA CTACACGGCC TACATGTATG TCGGCGACCT GGTCGAATAC
GGCGAAACGA AGGACATCTT CATGAAGCCC AAGCGCAAGG AAACCGAGGA CTACATCACC
GGCCGCTTCG GCTGA
 
Protein sequence
MTSTITLPEN APTLKAESKN LNFFYGDFKA LKGISMPIYE NKVTALIGPS GCGKSTYLRC 
FNRMHDLYSG TRYDGSIVLH PDEVDVLHKS VDPIEVRMRI SMVFQKPNPF PKSIYENVAY
GLRVRGEKSR SYIDDKVEAA LKGGALWGEV KDRLNEVAVN LSGGQQQRLC IARALATDPE
IILFDEPTSA LDPMATGSIE ELIGEIKNKV TILIVTHNMQ QAARVSDYTA YMYVGDLVEY
GETKDIFMKP KRKETEDYIT GRFG