Gene Lcho_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1655 
Symbol 
ID6161551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1765990 
End bp1766925 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID641664409 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001790687 
Protein GI171058338 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGA TACCGATCAC TGGCGCGGCC AAGCTGGCCG AATACGCGCA GGCCAAGGCG 
GCACGCAAGC GCCGCGAATT CATCATCGAG GCCGTGCTGC TGCTGGCAGC CTGCGTCTCG 
GTGTTCACCA CCGTGGGCAT CGTCTATGTG CTCGTCTCCG AATCCCTGAC GTTCTTCGCG 
GCCGTGCCGC TGTGGAACTT CCTGACCGAC ACGCAGTGGA CGCCGCTGTT CTCGGACGCC 
CATTTCGGCA TCATGGTGCT GATGTCGGGC ACGCTCACCA GCTCGCTGGT GGCGTTGTGC 
ATCGCGATCC CGCTGGGCAC GATCATCGCG ATCTACCTGT CCGAATTCGC CGGTCACAAG 
ACCCGCGAGA TCCTCAAGCC GATCCTCGAG CTTCTGTCGG GCGTGCCGAC CATCATCTAC 
GGCTACTTCG CGCTGCTGTT CGTGACGCCG CTGCTGCAGA TGGTCTTCCC CACGCTGCCC 
GGCTTCAACG TGCTGTCGGC CGGCATCGTG ATGGGCATCA TGATCATCCC CTACGTGTCG 
TCGCTGTCCG AGGACGCGAT GCGCGCGGTG CCGATGAGCC TGCGCGAAGG CTCCTACGCG 
ATGGGCGCCA CGCGTTTCCA GACCGCCACC AACGTGGTGG TGCCGGCGGC GATGTCGGGC 
ATCGCCTCGG CCTACATCCT GGGCATCTCG CGCGCGGTCG GCGAGACCAT GATCCTGGCG 
GTGGCCGCGG GCATGCAGCC CAACCTGACG TTCAACCCCT TCGAGCCGGC TGCAACGATC 
ACCTCGTTCA TCGTGCAGGT GGCGCTCGGT GACCTGCCGC ACGGCAGCGT GGGCTACCAG 
ACGATCTTTG CCGCCGGCCT GTCGCTGATG CTGCTGACGC TGTTCTTCAA CCTGGTCGGG 
CACTACCTGC GCCGCCGCTT CCGCGAGGTC TACTGA
 
Protein sequence
MSAIPITGAA KLAEYAQAKA ARKRREFIIE AVLLLAACVS VFTTVGIVYV LVSESLTFFA 
AVPLWNFLTD TQWTPLFSDA HFGIMVLMSG TLTSSLVALC IAIPLGTIIA IYLSEFAGHK 
TREILKPILE LLSGVPTIIY GYFALLFVTP LLQMVFPTLP GFNVLSAGIV MGIMIIPYVS 
SLSEDAMRAV PMSLREGSYA MGATRFQTAT NVVVPAAMSG IASAYILGIS RAVGETMILA 
VAAGMQPNLT FNPFEPAATI TSFIVQVALG DLPHGSVGYQ TIFAAGLSLM LLTLFFNLVG 
HYLRRRFREV Y