| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1647 |
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| Symbol | |
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| ID | 6161680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1754941 |
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| End bp | 1756605 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664401 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001790679 |
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| Protein GI | 171058330 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.344967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA TTGAAGTGAA GGTCCCCGAC ATCGGGGATT TCAAGGACGT CGCGATCATC
GAACTGCTGG TCAAGCCGGG TGACACCGTC AAGGCCGAGC AGAGCCTGCT CACCGTCGAG
AGCGACAAGG CCTCGATGGA GATCCCCAGC TCGCACGCCG GCGTGGTCAA GGACCTCAAG
GTCGCCCTGG GCGACAAGAT CAACGAAGGC ACCGTGGTGC TGACGCTCGA GGTGGCCGGT
GCCGCCGCGC CGGCTCCGGC ACCTGCCGCA GCGGCTGCGG TGCCTGCACC GGCCCCGGCT
GCTCCGGCGG CCGCGCCGGT GGCGGCACCC GCTGCGGCTG CGGCCGGCCC GATCGAGATC
TTCGTGCCCG ACATCGGTGA TTTCGACTCG GTCGCGGTGA TCGAGCTGCT GGTCAAGCCG
GGTGACACCG TCAAGGCCGA GCAGAGCCTG ATCACGGTCG AGAGCGACAA GGCCTCGATG
GAGATCCCGT CGTCGCATGC CGGCGTGATC AAGGAACTCA AGGTCAAGCT CGGCGACAAG
GTCAGCAAGG GTTCGCTGGT CGCGATCATC GAAGGCGCGG CCGGTGCCGC ACCGGCTGCG
GCTGCCCCGG CGCCTGCCGC TGCTGCCGCG CCTGCAGCCG CACCTGTCGC TGCGGCGGCT
GCCGTGGTGG CAGCGCCTGC CGCGGCCAGC GTGCCGGCCC ACGATCCCAC CGTGCTGAAC
CTGTCGCTGC CGCACGCATC GCCCAGCATC CGCAAGTTCG CCCGCGAACT GGGCGTGCCG
CTGGCCGAGG TCAAGGGCTC CGGCCCCAAG GGCCGCATCA CCGAGGTCGA CGTGCAAGGC
TTCGTCAAGG GCGTGATGGC CGGCACCGCG CAGACCGCGG CGCAGAAGGC CAAGGCGCCC
GCACCGGCTG CGGCCGGTGG TGGCGAGGCC TTCCCGGGCC TGCTGGCCTG GCCCAAGGTC
GATTTCGCCA AGTTCGGCCC GGTCGAGCGC AAGGACCTCT CGCGCATCAA GAAGATCTCG
GGCGCCAACC TGCACCGCAA CTGGGTGATC ATTCCGCACG TCACGAACCA TGACGACGCG
GACATCACCG ATCTCGAAGC CTTCCGCGTT GCCACCAACA AGGAAAACGA GAAGTCCGGC
GTCAAGGTCA CGATGCTGGC CTTCATGATC AAGGCGGCGG TCGCGGCGCT GAAGAAGTTC
CCCGAGTTCA ACGCCTCGCT CGACGGCGAC ACGCTGGTGC TCAAGAACTA CTTCCACATC
GGCTTCGCGG CCGATACGCC CAACGGCCTG ATGGTCCCGG TGATCAAGGA TGCCGACAAG
AAGGGCATCT TCCAGATCAG CACCGAGATG GGCGAGCTGG CCAAGAAGGC CCGCGACGGC
AAGCTCGGCC CCGCCGAGAT GAGCGGCGGC TGCTTCAGCA TCAGCTCGCT CGGCGGCATC
GGCGGGCGCT ATTTCACGCC CATCATCAAT GCGCCGGAAG TGGCCATCAT GGGCGTGTGC
AAGAGCGCCA TCGAGCCCAA GTGGGACGGC AAGGCCTTCC AGCCGCGCCT GATGCTGCCG
CTGTCGCTGT CGTGGGATCA CCGCGTCATC GACGGCGCGG CTGCGGCCCG CTTCAACGTC
TACTTCGCAT CGCTGCTGGC GGACTTCCGC CGCATCGTGC TCTGA
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| Protein sequence | MALIEVKVPD IGDFKDVAII ELLVKPGDTV KAEQSLLTVE SDKASMEIPS SHAGVVKDLK
VALGDKINEG TVVLTLEVAG AAAPAPAPAA AAAVPAPAPA APAAAPVAAP AAAAAGPIEI
FVPDIGDFDS VAVIELLVKP GDTVKAEQSL ITVESDKASM EIPSSHAGVI KELKVKLGDK
VSKGSLVAII EGAAGAAPAA AAPAPAAAAA PAAAPVAAAA AVVAAPAAAS VPAHDPTVLN
LSLPHASPSI RKFARELGVP LAEVKGSGPK GRITEVDVQG FVKGVMAGTA QTAAQKAKAP
APAAAGGGEA FPGLLAWPKV DFAKFGPVER KDLSRIKKIS GANLHRNWVI IPHVTNHDDA
DITDLEAFRV ATNKENEKSG VKVTMLAFMI KAAVAALKKF PEFNASLDGD TLVLKNYFHI
GFAADTPNGL MVPVIKDADK KGIFQISTEM GELAKKARDG KLGPAEMSGG CFSISSLGGI
GGRYFTPIIN APEVAIMGVC KSAIEPKWDG KAFQPRLMLP LSLSWDHRVI DGAAAARFNV
YFASLLADFR RIVL
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