Gene Lcho_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1639 
Symbol 
ID6161286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1741947 
End bp1742357 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID641664393 
Producthypothetical protein 
Protein accessionYP_001790671 
Protein GI171058322 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.106195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC TCAAGCGTCT GGGACTCGGT TGGGGTGCAG ATGAAAAACC CGCAGCAAGC 
CGCGGTCGGG CGGCAGAAGA CCGCGCCCTG ACGCACCTGC TGGCGCAGGG GCTGGCGCTG 
GTCGAGCGCA ATTATCGAGT GGCGCGCGGC CCGGCCCGGC GCGGCGGCGA AATCGACCTG 
GTGATGCGCG ACCGCGACGC CACGCTGGTG TTCGTGGAGG TGCGCAGCCG GCGCAATGCC 
CACCACGGCG GCGCGGCGGC CAGCGTGGGC CACGCCAAGC GCGCCAGCCT GATCTATGCC 
GCCCGGCACT ATCTGCTGCG CTTTCGTGCG CCGCCGGCCT GCCGATTCGA TCTGGTGGCG 
ATCGACGGCG ACGCGCTGGA ATGGCTGCCC GGCGCCTTCG ACGCCGGCTG A
 
Protein sequence
MSVLKRLGLG WGADEKPAAS RGRAAEDRAL THLLAQGLAL VERNYRVARG PARRGGEIDL 
VMRDRDATLV FVEVRSRRNA HHGGAAASVG HAKRASLIYA ARHYLLRFRA PPACRFDLVA 
IDGDALEWLP GAFDAG