| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1636 |
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| Symbol | |
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| ID | 6163458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1739656 |
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| End bp | 1740549 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664390 |
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| Product | 6-phosphogluconate dehydrogenase NAD-binding |
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| Protein accession | YP_001790668 |
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| Protein GI | 171058319 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0456713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA AGATCTACGA ACCCGTCGCG CCGCAGCGCG TCGCCTTTCT CGGCCTGGGC
GTGATGGGCG GCCCGATGGC CGGCCACCTG GCCCGCGCCG GCCACCAGGT CACGGTCTAC
AACCGCACGG CGGCCAAGGC GCAGGCCTGG GCGGCCGAAC ACGGCGGCAC CTTCGCGACC
ACCCCGCGCG AGGCGGCCCT GGGCGCCGAG ATCGTGTTCG CCTGCGTCGG CAACGACGAC
GACCTGCGCT CGGTGGTGCT GGGTGCCGAT GGCGCCTTCG CCGGCATGCA GCCCGGTGCG
GTGTTTGTCG ATCACACCAC CGCCTCGGCC GAGGTGGCGC GCGAGCTGGC CGGCGCGGCC
CGGGTGATCG GCCTGCGTTT CATCGACGCG CCGGTGTCGG GCGGCCAGGC CGGTGCGGTC
AACGGCGCGC TGACCGTGAT GTGCGGCGGC GACGCGCTTG CCTTCGAGGC CATCAAGCCG
GTGGCGATGG CATTCTCGAA GGCCGTCACG CTGCTGGGCG ACAGCGGCGC CGGCCAGCTC
GCCAAGATGG TCAACCAGAT CTGCATCGCC GGGCTGGTGC AGGGCCTGGC CGAGGCGATC
GCCTTCGGCC AGAACGCCGG CCTTGACATG AACCAGGTGC TCGACGTCAT CGGCAAGGGC
GCGGCGCAGA GCTGGCAGCT CGACAACCGC GGCAAGACCA TGGTCGAAGG CCGGTTCGAC
TTCGGCTTCG CGGTCGACTG GATGCGCAAG GACCTGGGCC TGGTGCTGGC CGAGGCGCGC
CGCAACGGCT CGCGCCTGCC GGTGACGGCG CTGGTGGACC AGTTCTACGC CGACGTGCAG
CAGCACGGCG GCCAGCGCTG GGACACCTCG AGCCTGATCA CGCGCCTGAA GTGA
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| Protein sequence | MSSKIYEPVA PQRVAFLGLG VMGGPMAGHL ARAGHQVTVY NRTAAKAQAW AAEHGGTFAT
TPREAALGAE IVFACVGNDD DLRSVVLGAD GAFAGMQPGA VFVDHTTASA EVARELAGAA
RVIGLRFIDA PVSGGQAGAV NGALTVMCGG DALAFEAIKP VAMAFSKAVT LLGDSGAGQL
AKMVNQICIA GLVQGLAEAI AFGQNAGLDM NQVLDVIGKG AAQSWQLDNR GKTMVEGRFD
FGFAVDWMRK DLGLVLAEAR RNGSRLPVTA LVDQFYADVQ QHGGQRWDTS SLITRLK
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