| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1627 |
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| Symbol | |
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| ID | 6160959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1727760 |
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| End bp | 1728575 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664381 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001790659 |
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| Protein GI | 171058310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00310738 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAT CCACACTGGC ATTCATCGGC GGCGGCAACA TGGCCAGCGC CATCATCGGC
GGGCTGATCA AGAGCGGCAC GCCCGCGGCG CAGATCCTCG TGGTCGAGCC GTATGCACCG
CAGCGCGACA AGCTGCGCGC CGATTTCGGC ATCGAGGCGC TGACCGCGGC CGATGCCTCG
CTGGCGCAGG CCGGCGCGGT GATCTGGGCC GTCAAGCCGC AGAGCTTTGC CGACGCCGCC
GCGCCCTGCG CCGCGTTTGT CGGCGGTGCG CTGCACCTGT CGGTGATGGC GGGCATCCGC
AGCGACGCGA TCGCACGCGC CACCGGCAGC GAGCGCATCG TGCGCGCCAT GCCCAACACG
CCGGCACTGA TCGGCATGGG CATCGCCGGG CTGTTCGCGC GTGCGGCTGT CGACGCCGAC
GACCGCGCGC TGGTCGAGCG CCTGCTCGCG CCCACCGGCG AGGTGGTGTG GGTGGCGCAG
GAGGCCGACC TCGACGCCGT CACCGCACTG TCGGGCTCGG GGCCGGCGTA TGTCTTCTAC
TTCGTCGAGG CGATGGTCGC CGCGGCCGAG CAGATGGGCC TCGGCGCCGA AGCCGGCAAG
AAGCTGGCAC TGGCGACCTT CGCCGGCGCG ACCGAACTGG CGCGCCGCAG CGACGAGACG
CCGGCGGTGC TGCGCGAGCG CGTCACGTCC AAGGGCGGCA CCACCTACGC GGCGCTGACG
GCCATGCGCG AGGCGGGCGT CGAGCCGGCG ATCGTCACGG CGCTGAAGGC GGCACAGCTA
CGGGCCCGCG AGCTGGGCGA CGAGTTCGGC GGCTGA
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| Protein sequence | MNTSTLAFIG GGNMASAIIG GLIKSGTPAA QILVVEPYAP QRDKLRADFG IEALTAADAS
LAQAGAVIWA VKPQSFADAA APCAAFVGGA LHLSVMAGIR SDAIARATGS ERIVRAMPNT
PALIGMGIAG LFARAAVDAD DRALVERLLA PTGEVVWVAQ EADLDAVTAL SGSGPAYVFY
FVEAMVAAAE QMGLGAEAGK KLALATFAGA TELARRSDET PAVLRERVTS KGGTTYAALT
AMREAGVEPA IVTALKAAQL RARELGDEFG G
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