| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1617 |
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| Symbol | |
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| ID | 6163507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1715764 |
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| End bp | 1716996 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664371 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001790649 |
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| Protein GI | 171058300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.035653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA AAATCCGCAC CGATCAGCTT CGGCTCGGCA TGTTTCTCCA CGAGCTGTGT
GGCTCGTGGA TGGATCATCC CTTCTGGCGC GCCAAGTTCG TGCTCCAGGA CGCCGACGAC
CTGCGCCGCC TGCGCGAGTG CGGCATCTCC GAAGTCTGGA TCGACACCGC GCTCGGGCTC
GACGTGGACG GCGGCTTGTC GCAGGCCGAG GTGGCGCTGC AGGTCGAAGA AGAGCTCGAG
GTGGCGGCGG TCGCCCTGCC TGCGCCGGCG CCGGTCGCGA CCTCGACACG CGACGAGCTG
GCGCGGGCCG CGCTGGTCTC CGATCAGGCC AAGCTCAAGG TGCAGTCGCT GTTCGGCGAA
GCGCGCATGG GCCAGGCGAT CCACGTCGAG GGCTGCCTGC CGCTGGTCGA CGACATCATC
GGCTCGGTGG CGCGCAACCA GGGCGCACTC GTCAGCCTGG TGCGCCTGAA GGCGCAGGAC
GAATACACCT ACATGCACTC GGTGGCGGTC TGCGCGCTGA TGGTCGCGCT GGCGCGCACC
CTCAAGCTGC CTGACGACGA GGTGCGCGCC GCCGGCCTGG CGGGCCTGCT GCACGACATG
GGCAAGGCGC GCATTCCGCT GGCCGTGCTC AACAAGCCCG GCCGCCTGAC GGACGACGAG
TTTCGCGTCA TGAGGCAGCA CCCTGCCTGG GGCCACGACC TGCTGCTCAC CAGCGGCGAC
GCGCCGGCGA TGGCGCTCGA CGTCTGCCTG CATCACCACG AGAAGGTCGA CGGCAGCGGC
TATCCGCACG CCTTGAAGGC CGATCAGATC AGCCTGCATG CCCAGATGGG CGCGGTCTGC
GACGTCTACG ATGCGGTGAC GTCGGCGCGC CCCTACAAGG CGCCGTGGGA CCCCGGCGAG
GCGGTGCGGC AGATGGCGCA ATGGAAGGGG CACTTCAATC CGAAGGTGTT CCAGGCCTTC
GTGAAGACGG TGGGCATCTA CCCGATCGGC ACGCTGGTCA AGCTGCAGTC GGGGCGGCTC
GGCGTGGTCA CCGAGCAGAA CGCCGAGTCG CTGCTGACGC CGCGGGTGAA GGTGTTCTTC
TCCACCAGGT CGATGCTGCC GGTGCGCCAG GAGGTGCTCG ACCTCGCCGA GCGCACCGCC
GCCGACCGCA TCGTGTCGGT CGAGCAGCCC GAGAAATGGA ACTTCAAGGG CCTCGACGAC
CTGTGGATCG ACGGCGCGCT GCCACGCCGC TGA
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| Protein sequence | MLKKIRTDQL RLGMFLHELC GSWMDHPFWR AKFVLQDADD LRRLRECGIS EVWIDTALGL
DVDGGLSQAE VALQVEEELE VAAVALPAPA PVATSTRDEL ARAALVSDQA KLKVQSLFGE
ARMGQAIHVE GCLPLVDDII GSVARNQGAL VSLVRLKAQD EYTYMHSVAV CALMVALART
LKLPDDEVRA AGLAGLLHDM GKARIPLAVL NKPGRLTDDE FRVMRQHPAW GHDLLLTSGD
APAMALDVCL HHHEKVDGSG YPHALKADQI SLHAQMGAVC DVYDAVTSAR PYKAPWDPGE
AVRQMAQWKG HFNPKVFQAF VKTVGIYPIG TLVKLQSGRL GVVTEQNAES LLTPRVKVFF
STRSMLPVRQ EVLDLAERTA ADRIVSVEQP EKWNFKGLDD LWIDGALPRR
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