| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1613 |
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| Symbol | |
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| ID | 6163503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1710281 |
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| End bp | 1711147 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664367 |
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| Product | 4-hydroxybenzoate polyprenyl transferase |
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| Protein accession | YP_001790645 |
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| Protein GI | 171058296 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0142555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG TCGCCTCCCG TTTTTCGCTC TATCTGAACC TGATCCGCTG GGATCGCCCG
GCCGGCTGGC TGCTGCTGCT GTGGCCGACG CTGGCCGCGC TGTGGATCGC CGCCGGCGGC
TTCCCCGGCT GGCACCTGCT GATCGTCTTC ACGCTCGGCA CGATCCTGAT GCGCAGCGCC
GGCTGCTGCA TCAACGACGT CGCCGACCGC GACTTCGACC GCCACGTCAA GCGCACCGCC
AACCGCCCCG TCACCAGCGG CGCCATCGGC GTGCGCGAGG CCTTGCTGGT GGGCGCCGTG
CTGGCGCTGG CGGCCTTCCT GCTGGTGCTG ACCACCAATG CGCCGACCAT CACCTGGTCG
TTCGCCGCGC TGGCGGTGGC GATGGCCTAC CCCTACGCCA AGCGCCACGT CTCGATGCCG
CAGGCGGTGC TGGGCGTGGC CTTCAGCTTC GGCATCCCGA TGGCGTTTGC GGCGGTGCAG
TCGCAGGTGC CGCCGGTCGC GATCGGCCTG CTGATCGGCA ACCTGTTCTG GGTGCTGGCC
TACGACACCG AATACGCGAT GGTCGACCGC GACGACGACC TGCGCATCGG CATCAAGACC
TCGGCGATCA CGCTGGGCGC GTTCGACGTG ATCGGCGTGA TGGCCTTCTA CGCCGCCTTC
GTGCTGATCT GGGGCCTGCT CGGCTGGCAG GCCGGGCTGC GCGTGCCGTT CATGATCGGC
CTGCTGGTGG CGGCAGCCCA GGCGGCGTGG CATTTCCGGC TGATCCGCGA CCGCAGCCGC
GACGGCTGTT TCAAGGCCTT CCGCGCCAAC CACTGGCTCG GTTTTGCGGT CTTCGCCGGC
GTGGTGGCCG ACTACAGCTT CGGTTGA
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| Protein sequence | MNLVASRFSL YLNLIRWDRP AGWLLLLWPT LAALWIAAGG FPGWHLLIVF TLGTILMRSA
GCCINDVADR DFDRHVKRTA NRPVTSGAIG VREALLVGAV LALAAFLLVL TTNAPTITWS
FAALAVAMAY PYAKRHVSMP QAVLGVAFSF GIPMAFAAVQ SQVPPVAIGL LIGNLFWVLA
YDTEYAMVDR DDDLRIGIKT SAITLGAFDV IGVMAFYAAF VLIWGLLGWQ AGLRVPFMIG
LLVAAAQAAW HFRLIRDRSR DGCFKAFRAN HWLGFAVFAG VVADYSFG
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