| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1612 |
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| Symbol | |
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| ID | 6160435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1709211 |
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| End bp | 1710266 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664366 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001790644 |
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| Protein GI | 171058295 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.01566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CGTCCGTGCC CGCCGATCCG TCCTCGCCGA ATCCCTTGCC GCTGCTGTTG
ACCCAGGGTG ACGTCTGCGG CATCGGCCCC GAGATCATCA TGGCGGCGGC CGGCCGGGGC
GAGCTGGCCG GCGTGGTGGT GCTGGGCGAT GTCGACGTGC TGCGGCGCGC CGCCGGCTGC
CTGCGCAGCA CCGACGACGG CCCGCGCCAG CCGATCGCCG TGCTCGACGA CCTGTCCGAT
CTTGCCGAGG TGCCGCCCGG CGCCTTGGCG GTGCTGCCGA TGCGCACGCC GATCGCCGGC
CTGGCGGACC TGCCTTGGGG CCGGATCGAT GCACGTGCAG GCCAGGCGGC GGCGGCCTGC
ATCCGCGAGG CGGTGGCCCA GGTGATGGCG GGCCGCGCGG CCGGCATCGT CACCGCGCCG
ATCCACAAGG AAGCGCTGTT TGCTGCCGGC GAGCCGTACC CCGGCCACAC CGAGATGCTG
GCCGACCTGG GCGGCCACGA TGGCCGGCCG GCCGACGTGC GCATGATGCT GGCCAACGAC
GAGCTCAAGA CCGTGCTCGT GACGGTGCAC TGCGCGCTGC GCGAGGCGAT CGAGCGTGTC
ACCACGCAGG CCGTGCTGTC GACGCTGCGC ATCGCCCATC GAACTGCGGC GCAGTGGGGC
CAGCCGGCAC CGCGCATCGG GGTGGCCGGG CTCAATCCGC ATGCCGGCGA GGGCGGGCTG
TTCGGGCGCG AGGAGATCGA CATCATCGCC CCGGCGATCG CCGCCGCGCA GGCCGAGGGC
ATCGCCGCCA GCGGGCCGCA TGCGCCCGAC ACCGTCTTCA TGCGCGCGCG CCGCGGCGAG
TTCGACATCG TGCTGGCGAT GTACCACGAC CAGGGGCTGA TCCCGGTCAA GTACCTGGGC
GTCGAACAGG GCGTCAACGT GACGCTGGGC CTGCCGTTCG TGCGCACCAG CCCCGATCAC
GGCACCGCGT TCGATCTGGC TGGCACCGGC CGCGCCGACC CGGCCAGCCT GATCGCCGCG
GTGCACATGG CGCGTCGGCT GCTGGCGGGC AGCTGA
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| Protein sequence | MNTPSVPADP SSPNPLPLLL TQGDVCGIGP EIIMAAAGRG ELAGVVVLGD VDVLRRAAGC
LRSTDDGPRQ PIAVLDDLSD LAEVPPGALA VLPMRTPIAG LADLPWGRID ARAGQAAAAC
IREAVAQVMA GRAAGIVTAP IHKEALFAAG EPYPGHTEML ADLGGHDGRP ADVRMMLAND
ELKTVLVTVH CALREAIERV TTQAVLSTLR IAHRTAAQWG QPAPRIGVAG LNPHAGEGGL
FGREEIDIIA PAIAAAQAEG IAASGPHAPD TVFMRARRGE FDIVLAMYHD QGLIPVKYLG
VEQGVNVTLG LPFVRTSPDH GTAFDLAGTG RADPASLIAA VHMARRLLAG S
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