| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1605 |
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| Symbol | |
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| ID | 6162047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1705117 |
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| End bp | 1706274 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664359 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001790637 |
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| Protein GI | 171058288 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00436797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGTGG CAGTGGTTTT CGTGCTCGCC ACCTTCAAGC CGGCTTGGCT CGGCGGCTGG
TCGGAGTTTG GCACGCGAGA CCGCGGCGGG CCGGCGGTCC AGGTGCTGAT GGCACCGGCG
CCCGCTGCCG TGCCGCAGGC CGCATCGGGC GTCGGCGGCG TGCAGAGCCT GGCCTACGCG
GCGCGGCGCG CGGCGCCGTC GGTGGTCAGC GTGGTGACCT CCGGCAGCCG GGGGCGCGGC
GAGGGCTCAC CACACGGCAG CGAGCCGTGG TTCCGGCGCT TCTTCGGCGA GCAGGATCAG
CCGGCCAACG GCATGGGTTC GGCGGTGATC GTCTCGACCG ACGGCTATCT GCTCACCAAC
AACCACGTCA TCGAAGGCGC CGAACAGATC GAGGTGGTGC TCGCGGATGG CCGCCGTTCG
GTGGCCAAGG TGATCGGCAG CGATCCCGAC AGCGACCTGG CGGTCCTCAA GATCGACGGC
CGTGACTTGC CCGCCGTCAC CTTCGGCGTG GCCGACGCGC TGCAGGTCGG CGACGTGGTG
CTGGCGATCG GCAACCCGTT CAATGTCGGC CAGACCGTCA CCTCGGGCAT CGTCAGCGCG
CTCGGCCGCA CCGGGCTGGG CCTCAATACC TTCGAGAACT TCATCCAGAC CGATGCCGCG
ATCAATCCCG GCAACTCGGG CGGTGCGCTG GTCGATGCCG GCGGCCAGCT GCTGGGCATC
AACACGGCGA TCTATTCGCG CTCGGGCGGC AGCATGGGCA TCGGTTTTGC CATCCCGGTG
ACGACCGCGC GCCAGGTGAT GGACGGCCTG ATCCGCAACG GCGTGGTCAC GCGCGGCTGG
ATCGGCGTGC AGCCGCGCGA TCTGACACCC GAGCTGGCCG AGTCGATCAA GAGCCGGGCG
ACCCAGGGCG TGCTGATCGC CGGTGTCCTG CAGGACGGCC CGGCCAGCGA CGCCGGCATG
TTGCCGGGCG ACGTGGTGCT GCGCATCGCC GGCCATCCGG TGGCCAACAC CGCGCAGCTG
CTCAACGAGG TGGCTGCGCT GGCGCCGCAG AGCCGCACCA GCGTGTCGAT CCTGCGTGGC
GATCAGGCGC TCGATCTGCA GGTCAAGGTG GCGCAACGGC CCAGTCTGCG GCCACGCCAG
TCCGACGACC AGCGCTGA
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| Protein sequence | MAVAVVFVLA TFKPAWLGGW SEFGTRDRGG PAVQVLMAPA PAAVPQAASG VGGVQSLAYA
ARRAAPSVVS VVTSGSRGRG EGSPHGSEPW FRRFFGEQDQ PANGMGSAVI VSTDGYLLTN
NHVIEGAEQI EVVLADGRRS VAKVIGSDPD SDLAVLKIDG RDLPAVTFGV ADALQVGDVV
LAIGNPFNVG QTVTSGIVSA LGRTGLGLNT FENFIQTDAA INPGNSGGAL VDAGGQLLGI
NTAIYSRSGG SMGIGFAIPV TTARQVMDGL IRNGVVTRGW IGVQPRDLTP ELAESIKSRA
TQGVLIAGVL QDGPASDAGM LPGDVVLRIA GHPVANTAQL LNEVAALAPQ SRTSVSILRG
DQALDLQVKV AQRPSLRPRQ SDDQR
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