| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1603 |
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| Symbol | |
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| ID | 6162045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1703458 |
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| End bp | 1704294 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664357 |
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| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
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| Protein accession | YP_001790635 |
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| Protein GI | 171058286 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000796384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCACA GCCTGCCCCC GCTCTACCTC TCCCACGGCT CGCCGATGAT CGCGATCGAG
CGCTCGCCGG CCTCCGATTT CCTGGATCGT CTCGGCCCGG TGATCGACCG CACCTTCGGA
CGCCCGCGTG CCGTGCTGGT GGTGTCGCCG CATTCGGCCA CCCGCACGCC GATGGTGATG
GCGGGCGCGC GCCACGAGGC GATCCACGAT TTTGGCGGCT TCCCCGACGC GCTCTACCAG
CAGCGCTACA GCACCGCCGG CGCGCCGCTG CTGGCCGCCG ACGTGGCGCA GCGGCTCGTC
AAGGTCGGCC TGAATGCCCA GGCGGTCGAC GCCTCGGGTC TTGATCACGG CATCTGGACG
GTGCTCAAGC GTGCCTGGCC GGATGCCTCG ATCCCCGTCG TGCCGCTGAC CCTGGTGCCC
AACTGGACAC CCGCGCAGCA ATGGGCGGTG GGCGCGGCGC TGGCCGATCT GGCCGACGAC
GGCGTGCTGA TCATCGGCAG CGGCTCGCTG ACGCACAACC TGCGGCGCTT CTTCGGCGAG
CGCCCGAGCG CCGACGCGCC GGTGTCGCCC GACGTGGCGG CGTTCCAGGA CTGGATCCGC
CAGCGCGGCG CCGCCTGCGA CTGGCCGGCG CTGTTCGACT ACCGCCGCCA GGCGCCGCAT
GCGGCCCAGC AGCATCCGAC CGACGAACAC TGGCTGCCGT ACTACATCGC CGCCGGTGCG
GGTGGCGAGA CCCAGCCGGC GGTGCGCATC CACGCCAGCG TCGACGCCGG CATCCTGGCG
ATGGACGGCT ACGCCTTCGG ACCGCAGGCC GCACGCTTGG CTGAGGCGCT GGGCTGA
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| Protein sequence | MTHSLPPLYL SHGSPMIAIE RSPASDFLDR LGPVIDRTFG RPRAVLVVSP HSATRTPMVM
AGARHEAIHD FGGFPDALYQ QRYSTAGAPL LAADVAQRLV KVGLNAQAVD ASGLDHGIWT
VLKRAWPDAS IPVVPLTLVP NWTPAQQWAV GAALADLADD GVLIIGSGSL THNLRRFFGE
RPSADAPVSP DVAAFQDWIR QRGAACDWPA LFDYRRQAPH AAQQHPTDEH WLPYYIAAGA
GGETQPAVRI HASVDAGILA MDGYAFGPQA ARLAEALG
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