| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1599 |
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| Symbol | |
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| ID | 6162618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1695173 |
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| End bp | 1697341 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664353 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001790631 |
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| Protein GI | 171058282 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00193702 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAAA TGACCTCCTC CGAGGGAGCC AGCGCAAGCG CGGGCATCGA CCTCAGCCAG
TTCTATCAGG TCTTCTTTGA AGAAGCCGGC GAGAACCTGC AGCGCATGGA ACAGCAGCTG
CTCGAACTCG ACCTCAGCGC CGCCGACGAC GAGGCGATGA ACGCGATCTT CCGCTGCGCC
CACTCGATCA AGGGCGGCGC CGCCACCTTC GGGTTCAGCG ACGTGGCCGA GCTGACGCAC
GAGATGGAGA CGCTGCTCGA CAAGCTGCGC CGCCACGAGC TGGCGCCGCA TGCCCGCATG
GTCGACGTGC TGCTGGCCGC CGGCGACGCG CTGCGCGAGC AGCTCGGCCG CCACCAGGGC
AGCGGTGCCG ACCCGGTCGA CACCACCGAG CTGCTGCTGG CCATCAAGGC GATGTCGTCG
GGCGAGGTGC CGCCGGCGCA GCCTGCCGCT GCCGCCTCGG TCGCCGCCGT CGCATCGGTG
GCCGTCACGG CCCAGCCGGA GCCCGTGCAC GCCGGCCTGC GCGAGCTCGA CCTGCGGGTC
GGCCCGCTCG ACGACCCGAA ACAGGCCGAC AACCTGCTCG ACCTGTTCAA GGAGATCACC
GACCTCGGCA CCATCGAGCC GATCGACATC GGCCAGGCGG CCGACGGCAT GCGCCGCTAC
AAGGTCGTGA CCAGCAGCAC CGACGCCGAG CTGCTCGATC TGTTCACCTT CCATGTGGCG
CGTGAGCAGG TGCAGCTGCA ACCCTTCGGC CCCGGCTACG GCTTCCATGC CGGCAACCCG
GGCGTGCCCG AAGGTGCAAC GCCGCTCGAC ATCGAGCCGG CCGCCGAAGC GGCCCCGCAC
GATCCGGGCT ACGGCTTCTT CGACGGTGCG CCAGGCGCAC CGGGTGCACG GGCCGCCGCC
GCGCCCGCGA CGCCGGTGGT CGTGCCGGTC GCCGAAGCCA AGGCCGCGCC GGTGGTGCCG
GCCAGGCCGG CCGCGCGCGC CGACAAGCCG GCCTCGGGCG GGCTCGATTC CAGCACCATC
CGGGTCTCGG TCGAGAAGGT CGACCAGCTC ATCAACCTGG TGGGCGAACT CGTCATCACG
CAGGCGATGC TGGCGCAGAA CAGCCGCGAC CTCGATCCGG TGCTCTACCA GCAGCTGATC
GCCGGCCTGA ACGACCTCGA CCGCAACACC CGCGACATGC AGGAATCGGT GATGTCGATC
CGCATGATCC CGATGTCGAC CGTCTTCAGC CGCTTCCCGC GCATGCTGCG CGACCTGGCG
GCCAAGCTGG GCAAGAAGGT CGAGCTGGTC ACGCAGGGCG AGGCCACCGA ACTCGACAAG
GGCCTGATCG AGAAGATCAC CGATCCTCTC ACCCACCTGG TGCGCAACAG CTGCGACCAC
GGCTGCGAGA TGCCGGCCGA CCGCATCGCC CGTGGCAAGC CCGAGACCGG CATCATCACG
CTGAGCGCCT CGCACCAGGG CGGCTCGATC GTCATCGAGG TGCGCGACGA CGGCCGCGGC
CTGTCGCGCG ACAAGCTGCT GCGCAAGGCC CGCGAACGTG GCATCGACGC GCCCGACAGC
ATGAGCGACC AGGACGTCTG GGGCCTGATC TTCGCGCCCG GCTTCTCGAC CGCCGACGTC
GTCACCGACG TGTCGGGCCG GGGTGTCGGC ATGGACGTGG TCAAGAAGAA CATCACCAGC
CTGGGCGGCA CGGTCGAGAT CGATTCGGCC GAGGGCTACG GCATGAGCGT CAAGGTGCGC
CTGCCGCTGA CGCTGGCCAT CATGGACGGC ATGAGCGTGG GCGTGGCCGA CGAGGTCTAC
ATCCTGCCGC TGGCCTCGGT GGTGGAGAGC TTCCAGGTCA CCGACAAGAC CATCAAGACC
ATCGGCGGCA CCGGCCGCAT CGTGCAGGTG CGCGACGAGT ACATGCCGGT GATCGAGCTG
GAGAAGGTGT TCGAGGTGCC ACGCTTCGAC TTCGAGCGCG TCGCCGCCAT CATGGTGGTG
GTCGAGGCCG AAGGCGGGCG GGTCGCCCTG CTGGTCGACG AACTGCTCGG CCAGCAGCAG
GTGGTGGTCA AGAACCTCGA GTCCAACTAC CGCCGGGTGC CCGACGTGTC GGGGGCCACC
ATCATGGGCG ATGGCCGCGT CGCGCTGATT CTCGATACCG GTTCGCTGGT GCGTCGTTCG
CGCCATTGA
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| Protein sequence | MAEMTSSEGA SASAGIDLSQ FYQVFFEEAG ENLQRMEQQL LELDLSAADD EAMNAIFRCA
HSIKGGAATF GFSDVAELTH EMETLLDKLR RHELAPHARM VDVLLAAGDA LREQLGRHQG
SGADPVDTTE LLLAIKAMSS GEVPPAQPAA AASVAAVASV AVTAQPEPVH AGLRELDLRV
GPLDDPKQAD NLLDLFKEIT DLGTIEPIDI GQAADGMRRY KVVTSSTDAE LLDLFTFHVA
REQVQLQPFG PGYGFHAGNP GVPEGATPLD IEPAAEAAPH DPGYGFFDGA PGAPGARAAA
APATPVVVPV AEAKAAPVVP ARPAARADKP ASGGLDSSTI RVSVEKVDQL INLVGELVIT
QAMLAQNSRD LDPVLYQQLI AGLNDLDRNT RDMQESVMSI RMIPMSTVFS RFPRMLRDLA
AKLGKKVELV TQGEATELDK GLIEKITDPL THLVRNSCDH GCEMPADRIA RGKPETGIIT
LSASHQGGSI VIEVRDDGRG LSRDKLLRKA RERGIDAPDS MSDQDVWGLI FAPGFSTADV
VTDVSGRGVG MDVVKKNITS LGGTVEIDSA EGYGMSVKVR LPLTLAIMDG MSVGVADEVY
ILPLASVVES FQVTDKTIKT IGGTGRIVQV RDEYMPVIEL EKVFEVPRFD FERVAAIMVV
VEAEGGRVAL LVDELLGQQQ VVVKNLESNY RRVPDVSGAT IMGDGRVALI LDTGSLVRRS
RH
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