| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1591 |
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| Symbol | |
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| ID | 6162998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1689100 |
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| End bp | 1689849 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664345 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001790623 |
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| Protein GI | 171058274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0054388 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCTGA TCCCGGCCAT CGACCTCAAA GACGGCAAGT GCGTGCGCCT CAAGCAAGGC
GACATGAACG ATTCCACCAC CTTCGGCGAG GACCCTGCCG CAATGGCGCG GCGCTGGGTC
GATGCCGGCG CGCGTCGCCT GCATCTGGTC GATCTGAACG GCGCCTTTGC CGGCAAGCCG
GTCAACGAAG GCGCGATCAA GTCCATCATC GCCGCCGTCG GCGGTGACAT CCCGATCCAG
CTCGGCGGCG GCATCCGCGA CCTCGACACC ATCGAGCGAT ACCTCGACGA TGGCCTGAGC
TACGTGATCA TCGGCACCGC CGCGGTCAAG AACCCGGGTT TCCTGCGCGA CGCCTGCACC
GCGTTCGGCG GCCACATCAT CGTCGGCCTC GACGCCCGTG ACGGCAAGGT CGCCACCGAC
GGCTGGAGCA AGCTGACCGG CCACGAGGTG GTCGACCTGG CGCGCAAGTT CCAGGACTAC
GGCGTCGAAG GCGTGATCTA CACCGACATC GGCCGCGACG GCATGTTGAG CGGCATCAAC
ATCGAGGCCA CCGTCAAGCT GGCGCAGGCG TTGACCATTC CCGTGATCGC CTCGGGTGGC
CTGAGCAACA TGGCCGACAT CGACGCGCTG TGCGCCGTCG AGCACGAAGG CGTGGACGGC
GTGATCTGCG GGCGCTCGAT CTATTCGGGC GACCTGGATT TCGCTGCCGG TCAGAAGCGC
GCCGACGAAC TCAACGGCGG CAGGGTCTGA
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| Protein sequence | MLLIPAIDLK DGKCVRLKQG DMNDSTTFGE DPAAMARRWV DAGARRLHLV DLNGAFAGKP
VNEGAIKSII AAVGGDIPIQ LGGGIRDLDT IERYLDDGLS YVIIGTAAVK NPGFLRDACT
AFGGHIIVGL DARDGKVATD GWSKLTGHEV VDLARKFQDY GVEGVIYTDI GRDGMLSGIN
IEATVKLAQA LTIPVIASGG LSNMADIDAL CAVEHEGVDG VICGRSIYSG DLDFAAGQKR
ADELNGGRV
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