| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1588 |
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| Symbol | |
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| ID | 6163007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1686581 |
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| End bp | 1687708 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664342 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_001790620 |
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| Protein GI | 171058271 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00615435 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTCCA GCACCGCCTC CCAGCCGCTC GCCACCCGCC TGCAAGCCAC CTTGCGCCAG
GACGTGCAGG GCATGCACGC CTACGCGGTG CAGCCCAGCG CCGGCTACAC CAAGCTCGAC
GCGATGGAAA ACCCGTTCAC GCTGCCGCCC GAGCTGCAGC ATGAGCTGGG CGAGCGCCTC
GGCCGTGTCG CGATCAACCG TTACCCGGGC GGCCGCGTCG ACGACCTGAA GGCTGCGCTC
GCGCAGCACA TCGATCTGCC CGCCGGTTGC AGCCTGATGC TCGGCAACGG CTCGGACGAG
CTGATCGCCT TGCTGGCGCT GGCCTGCGAC GTGCCCGGTG CCAAGATCCT GGCGCCCGTG
CCCGGCTTCG TGATGTACGC GATGTCGGCG CAGTTGCAGG GGCTGGAATT CGTCGGCGTG
CCGCTGACGG CCGAGTTCGA GCTGGACGAG GCGGCGATGC TCTCGGCCAT CGAAACGCAT
CGCCCGGCCA TCACCTACAT CGCCTACCCG AACAACCCGA CCGCGAACCT GTTCGACGAG
TCGACGATCG AGAAGATCGT CGCGGCGGTG GGTGCGCAGA ACGGCCTGGT GGTGTTCGAC
GAGGCCTATC AGCCGTTTTC GTCGCGCAGC TGGATGGGCC GCGTCGGCCG GCACGACCAC
GTGCTGGTGA TGCGCACGCT CAGCAAGTTC GGCCTGGCCG GCATCCGCCT GGGCTACATG
GCCGGCCCGG CGGCGCTGAT CGCCGAGATC GACAAGGTGC GCCCGCCGTA CAACGTCAGC
GTGCTGAACG CGGAAGCGGC ACTGTTTGCA CTCGAACACG CCGACGAATA CGCCCGCCAG
GCCGCGATCC TGCGCGCCGA GCGCGAGCGG CTGCAGGCGG CGCTCAACGC CATGCCCGGC
GTGCAGAGCC ATCCGAGCGA GGCCAACATG ATCCTGGTGC GTGTCGCCGA CGGCGCGGCG
GTGTTCGCCG GCCTGAAGCA GCGCGGCGTG CTGATCAAGA ACGTCGCCGG CCTGCATCCG
TCGCTGAAGA ACTGCCTGCG CCTGACGGTG GGCACGCCCG AGGAAAATCA GCAGATGTTG
GCGGCACTGG CCGCCGCCGT GATGTCCGTG ATGGAAAAGC AGTCATGA
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| Protein sequence | MSSSTASQPL ATRLQATLRQ DVQGMHAYAV QPSAGYTKLD AMENPFTLPP ELQHELGERL
GRVAINRYPG GRVDDLKAAL AQHIDLPAGC SLMLGNGSDE LIALLALACD VPGAKILAPV
PGFVMYAMSA QLQGLEFVGV PLTAEFELDE AAMLSAIETH RPAITYIAYP NNPTANLFDE
STIEKIVAAV GAQNGLVVFD EAYQPFSSRS WMGRVGRHDH VLVMRTLSKF GLAGIRLGYM
AGPAALIAEI DKVRPPYNVS VLNAEAALFA LEHADEYARQ AAILRAERER LQAALNAMPG
VQSHPSEANM ILVRVADGAA VFAGLKQRGV LIKNVAGLHP SLKNCLRLTV GTPEENQQML
AALAAAVMSV MEKQS
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