| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1587 |
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| Symbol | hisD |
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| ID | 6163006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1685212 |
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| End bp | 1686528 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664341 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_001790619 |
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| Protein GI | 171058270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.012864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACG TCGCTGTCCG TCACCTCGAT ACCTCCGCCG CCGATTTCGA AGCCGAGTTC
CGGCGTGTCC AGCATTGGTC GGCCGAGACC GATCATGCGA TCGAGCAGCG CGTGGCTGAA
ATCCTGGACG ACGTGCGCGA GCGTGGCGAC GCCGCGGTGC TCGACTACAC CGCGCGCTTC
GACGGCCTGC AGGCCGAATC GATGGCGGCG CTGGAGCTGA CGCGCGACGA GCTGAAAGCC
GCGTTCGACG CCATCACCCC GGCCCAGCGT GACGCGCTGC AAGCCGCCAC TGCCCGGGTG
CGCAGCTACC ACGAGCGCCA GCTGCAGGCC AGCGGCCTGA GCTGGAGCTA TCGCGACGAG
GACGGCACGC TGCTCGGCCA GAAGGTCACG CCGCTGGACC GCGTGGGCAT CTACGTGCCC
GGCGGCAAGG CCGCCTATCC GTCGAGCGTG CTGATGAACG CGATCCCCGC GACCGTGGCG
GGCGTCGGTG AAATCATCAT GGTCGTGCCC ACCCCCAAGG GCGAGAAGAA CGCGCTGGTG
CTGGCCGCCG CTTACGTGGC CGGCGTGCAC CGCGCCTTCA CGATCGGCGG CGCACAGGCG
GTCGGCGCGC TGGCCTACGG CACGGCCACC GTGCCGCGGG TCGACAAGAT CACCGGCCCG
GGCAACGCCT ACGTGGCGAG CGCCAAGCGG CGCGTGTTCG GCCAGGTCGG CATCGACATG
ATCGCCGGCC CGAGCGAGAT CCTGGTGCTG GCCGACGGCA GCACGCCGCC CGACTGGGTG
GCGATGGACC TGTTCAGCCA GGCCGAACAC GACGAACTGG CGCAGTCGAT CCTGCTGTGC
CCGGACGCCG ATTACATCGC TCGCGTTCAG ACCGAGATCG ACCGCCTGAT CGACGCCATG
CCGCGCCGCG ACGTCATCCG CGCCTCGCTC GAAGGCCGCG GTGCGCTGAT CCGCACGCGC
TCGATGGAAG AAGCCTGCGA GATCAGCAAC CGCATCGCGC CCGAGCACCT CGAAGTGAGT
TCTGCCGAGC CGCACCGCTG GGAGCCGCTG CTGCGCCATG CCGGCGCGAT CTTCCTGGGC
GCCTACACCA GCGAATCGCT GGGCGACTAC TGCGCCGGCC CGAACCACGT GCTGCCGACC
TCGGGCACCG CGCGCTTCTC GTCACCGCTG GGCGTCTACG ACTTCCAGAA GCGCAGCAGC
CTGATCGAGG TGAGCGAGCA GGGCGCGCAG ACGCTGGGCC TGATCGCCGC CGAGCTGGCC
TACGGCGAAG GCCTGCAGGC GCATGCGCAG GCGGCCGAGT TCCGGCTCAA TCGGTGA
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| Protein sequence | MSHVAVRHLD TSAADFEAEF RRVQHWSAET DHAIEQRVAE ILDDVRERGD AAVLDYTARF
DGLQAESMAA LELTRDELKA AFDAITPAQR DALQAATARV RSYHERQLQA SGLSWSYRDE
DGTLLGQKVT PLDRVGIYVP GGKAAYPSSV LMNAIPATVA GVGEIIMVVP TPKGEKNALV
LAAAYVAGVH RAFTIGGAQA VGALAYGTAT VPRVDKITGP GNAYVASAKR RVFGQVGIDM
IAGPSEILVL ADGSTPPDWV AMDLFSQAEH DELAQSILLC PDADYIARVQ TEIDRLIDAM
PRRDVIRASL EGRGALIRTR SMEEACEISN RIAPEHLEVS SAEPHRWEPL LRHAGAIFLG
AYTSESLGDY CAGPNHVLPT SGTARFSSPL GVYDFQKRSS LIEVSEQGAQ TLGLIAAELA
YGEGLQAHAQ AAEFRLNR
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