Gene Lcho_1586 details

Gene Information

• Locus tag: Lcho_1586
• Symbol: hisG
• ID: 6163005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1684528
• End bp: 1685172
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641664340
• Product: ATP phosphoribosyltransferase catalytic subunit
• Protein accession: YP_001790618
• Protein GI: 171058269
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0040] ATP phosphoribosyltransferase
• TIGRFAM ID: [TIGR00070] ATP phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.0087708
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATCACAC TCGCACTTTC CAAAGGCCGC ATCTTCGAAG AGACGCTGCC GTTGCTGGCC 
GCGGCCGGCA TCGAGGTCAC CGAAGATCCC GAGAAGAGCC GCAAGCTGAT CCTGCCGACC 
AACCGTGCCG ACATGCAGGT GGTGATGGTG CGCGCCACCG ACGTGCCGAC CTACGTGCAG 
TACGGCGGCG CCGATCTGGG CGTGGCGGGC AAGGACATCC TGATCGAGCA CGGCGGCGAA 
GGCCTCTACC AGCCGATCGA CCTGCGAATC GCCCGCTGCC GCATGAGCGT GGCCACGCGC 
GCCGACTTCG ACTACGACAG CGCCGTCAAG AAGGGCTCGC GCATCCGTGT GGCCACCAAG 
TACACGGCCA TCGCGCGCCA GCATTTCGCC GACAAGGGCG TGCACGTCGA CCTGATCAAG 
CTCTACGGCT CGATGGAGCT GGCGCCGCTG ACCGGCCTGG CCGATGCGAT CGTCGACCTG 
GTGTCGACCG GCAGCACGCT CAAGGCCAAT CACCTGCGCG AGGTCGAGCC TTTCATGGAG 
ATCTCGTCGC GCCTGGTCGT CAACCAGGCC GCCCTCAAGC TCAAGCGCGA ACGCCTGCGC 
CCGCTGATCG ACGCCATCGC GGCGGCGGTT GCGGCACGCG GCTGA 

 

Protein sequence

MITLALSKGR IFEETLPLLA AAGIEVTEDP EKSRKLILPT NRADMQVVMV RATDVPTYVQ 
YGGADLGVAG KDILIEHGGE GLYQPIDLRI ARCRMSVATR ADFDYDSAVK KGSRIRVATK 
YTAIARQHFA DKGVHVDLIK LYGSMELAPL TGLADAIVDL VSTGSTLKAN HLREVEPFME 
ISSRLVVNQA ALKLKRERLR PLIDAIAAAV AARG