| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1585 |
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| Symbol | |
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| ID | 6163004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1683177 |
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| End bp | 1684442 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664339 |
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| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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| Protein accession | YP_001790617 |
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| Protein GI | 171058268 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0115756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAC TCCTGATCCG CGGCGGCCGC CCCTTGATGG GTGAAGTCAC CATCTCCGGC
GCCAAGAACG CCGCCCTGCC CGAGCTCTGC GCCGCGCTGC TGTGCCCCGA GCCGCTGACG
CTGGCCAACG TGCCGCGCCT GCAGGACGTC GGCACCACGC TCAAGGTGCT GCGCCACCTC
GGCGTCGAGG CCGAACGCAG CGCCGTGCTG CCCGACCAGG TGCGCCTGGA CGCCACCCGC
ATCACCACCC GCGAAGCGCC CTACGAGCTG GTCAAGACCA TGCGCGCGTC GATCCTGGTG
CTGGGCCCGC TGCTGGCGCG TTTCGGCGAG GCGCGGGTGT CGTTGCCCGG CGGCTGCGCG
ATCGGCTCTC GGCCGGTCGA CCAGCACATC AAGGGCCTGC AGGCGATGGG TGCGCAGATC
GTGGTCGAGC ACGGCTACAT CGTCGCGCGT GCCGAGCGCC TGAAGGGCGC GCGCATCACC
ACCGACATGG TCACCGTCAC CGGCACCGAG AACCTGCTGA TGGCCGCCAC CCTGGCCGAT
GGCGAGACGG TGCTCGAAAA CGCCGCCCAG GAGCCCGAGA TCACCGACCT GGCCGAGCTG
CTGATCGCGA TGGGCGCGCA GATCGAAGGG CAGGGCACGC ACCGCATCCG CATCCAGGGC
GTCGAGCGCC TGCATGCGCC GGCCGTGCCG CACCAGATCA TCCCCGACCG CATCGAGACC
GGCACCTTCC TGTGCGCGGT GGCCGCCACC GGCGGTGACG TGACGCTGCG CCGCACCCGC
GCCGACCACC TCGACGCCGT GCTCGACAAG CTGCGAGAAG CCTGCACCGA GCTCGAATGC
GGCGCCGACT GGATCCGCGT GCGCGCTGCC GGCCGGCCCA AGGGCGTGAA CCTGCGAACC
AGCGAGTACC CGGCCTTTCC GACCGACATG CAGGCGCAGT TCATGGCGCT CAACTGCATC
GCGCAAGGCA CCTCGCGGGT GATCGAGACC ATCTTCGAGA ACCGCTTCAT GCACGTCAAC
GAGCTGGTGC GCCTGGGCGC GCACATCGCC GTCGACGGCC ACACGGCGAT CGTCGAAGGC
ATCGCCCGGC TGTCGGGCGC CACCGTGATG GCGACCGACC TGCGCGCCTC GGCCAGCCTG
GTGATCGCCG GCCTGGTGGC CGAGGGCGAA ACCACCGTCG AGCGCATCTA CCACCTCGAC
CGCGGCTACG ACCAGATGGA AACCAAGCTG CGCGGCATCG GCGCCGACAT CGAACGAATC
AAATGA
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| Protein sequence | MDKLLIRGGR PLMGEVTISG AKNAALPELC AALLCPEPLT LANVPRLQDV GTTLKVLRHL
GVEAERSAVL PDQVRLDATR ITTREAPYEL VKTMRASILV LGPLLARFGE ARVSLPGGCA
IGSRPVDQHI KGLQAMGAQI VVEHGYIVAR AERLKGARIT TDMVTVTGTE NLLMAATLAD
GETVLENAAQ EPEITDLAEL LIAMGAQIEG QGTHRIRIQG VERLHAPAVP HQIIPDRIET
GTFLCAVAAT GGDVTLRRTR ADHLDAVLDK LREACTELEC GADWIRVRAA GRPKGVNLRT
SEYPAFPTDM QAQFMALNCI AQGTSRVIET IFENRFMHVN ELVRLGAHIA VDGHTAIVEG
IARLSGATVM ATDLRASASL VIAGLVAEGE TTVERIYHLD RGYDQMETKL RGIGADIERI
K
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